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LINC01989 (long intergenic non-protein coding RNA 1989)

Identity

Other alias-
HGNC (Hugo) LINC01989
LocusID (NCBI) 101927239
Atlas_Id 79470
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 34169376 and ends at 34183632 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01989   52821
Cards
Entrez_Gene (NCBI)LINC01989  101927239  long intergenic non-protein coding RNA 1989
Aliases
GeneCards (Weizmann)LINC01989
Ensembl hg19 (Hinxton)ENSG00000261156 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261156 [Gene_View]  chr17:34169376-34183632 [Contig_View]  LINC01989 [Vega]
ICGC DataPortalENSG00000261156
TCGA cBioPortalLINC01989
AceView (NCBI)LINC01989
Genatlas (Paris)LINC01989
WikiGenes101927239
SOURCE (Princeton)LINC01989
Genetics Home Reference (NIH)LINC01989
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01989  -     chr17:34169376-34183632 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01989  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblLINC01989 - 17q12 [CytoView hg19]  LINC01989 - 17q12 [CytoView hg38]
Mapping of homologs : NCBILINC01989 [Mapview hg19]  LINC01989 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC062794
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01989
Cluster EST : UnigeneHs.603592 [ NCBI ]
CGAP (NCI)Hs.603592
Alternative Splicing GalleryENSG00000261156
Gene ExpressionLINC01989 [ NCBI-GEO ]   LINC01989 [ EBI - ARRAY_EXPRESS ]   LINC01989 [ SEEK ]   LINC01989 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01989 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927239
GTEX Portal (Tissue expression)LINC01989
Human Protein AtlasENSG00000261156-LINC01989 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01989
DMDM Disease mutations101927239
Blocks (Seattle)LINC01989
Human Protein Atlas [tissue]ENSG00000261156-LINC01989 [tissue]
Protein Interaction databases
FunCoupENSG00000261156
BioGRIDLINC01989
STRING (EMBL)LINC01989
ZODIACLINC01989
Ontologies - Pathways
Huge Navigator LINC01989 [HugePedia]
snp3D : Map Gene to Disease101927239
BioCentury BCIQLINC01989
ClinGenLINC01989
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927239
Clinical trialLINC01989
Miscellaneous
canSAR (ICR)LINC01989 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01989
EVEXLINC01989
GoPubMedLINC01989
iHOPLINC01989
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:35:50 CET 2017

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