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LINC01991 (long intergenic non-protein coding RNA 1991)

Identity

Other alias-
HGNC (Hugo) LINC01991
LocusID (NCBI) 105374266
Atlas_Id 79303
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 187964711 and ends at 187976407 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01991   52823
Cards
Entrez_Gene (NCBI)LINC01991  105374266  long intergenic non-protein coding RNA 1991
Aliases
GeneCards (Weizmann)LINC01991
Ensembl hg19 (Hinxton)ENSG00000224187 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224187 [Gene_View]  ENSG00000224187 [Sequence]  chr3:187964711-187976407 [Contig_View]  LINC01991 [Vega]
ICGC DataPortalENSG00000224187
TCGA cBioPortalLINC01991
AceView (NCBI)LINC01991
Genatlas (Paris)LINC01991
WikiGenes105374266
SOURCE (Princeton)LINC01991
Genetics Home Reference (NIH)LINC01991
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01991  -     chr3:187964711-187976407 -  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01991  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01991 - 3q27.3 [CytoView hg19]  LINC01991 - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBILINC01991 [Mapview hg19]  LINC01991 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA255943 BX364319 BX403058
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01991
Cluster EST : UnigeneHs.570518 [ NCBI ]
CGAP (NCI)Hs.570518
Alternative Splicing GalleryENSG00000224187
Gene ExpressionLINC01991 [ NCBI-GEO ]   LINC01991 [ EBI - ARRAY_EXPRESS ]   LINC01991 [ SEEK ]   LINC01991 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01991 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374266
GTEX Portal (Tissue expression)LINC01991
Human Protein AtlasENSG00000224187-LINC01991 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01991
DMDM Disease mutations105374266
Blocks (Seattle)LINC01991
Human Protein Atlas [tissue]ENSG00000224187-LINC01991 [tissue]
Protein Interaction databases
FunCoupENSG00000224187
BioGRIDLINC01991
STRING (EMBL)LINC01991
ZODIACLINC01991
Ontologies - Pathways
Huge Navigator LINC01991 [HugePedia]
snp3D : Map Gene to Disease105374266
BioCentury BCIQLINC01991
ClinGenLINC01991
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374266
Clinical trialLINC01991
Miscellaneous
canSAR (ICR)LINC01991 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01991
EVEXLINC01991
GoPubMedLINC01991
iHOPLINC01991
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:37 CEST 2018

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