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LINC01994 (long intergenic non-protein coding RNA 1994)

Identity

Other alias-
HGNC (Hugo) LINC01994
LocusID (NCBI) 401103
Atlas_Id 79535
Location 3q26.33  [Link to chromosome band 3q26]
Location_base_pair Starts at 182446970 and ends at 182486362 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01994   52827
Cards
Entrez_Gene (NCBI)LINC01994  401103  long intergenic non-protein coding RNA 1994
Aliases
GeneCards (Weizmann)LINC01994
Ensembl hg19 (Hinxton)ENSG00000241098 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241098 [Gene_View]  ENSG00000241098 [Sequence]  chr3:182446970-182486362 [Contig_View]  LINC01994 [Vega]
ICGC DataPortalENSG00000241098
TCGA cBioPortalLINC01994
AceView (NCBI)LINC01994
Genatlas (Paris)LINC01994
WikiGenes401103
SOURCE (Princeton)LINC01994
Genetics Home Reference (NIH)LINC01994
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01994  -     chr3:182446970-182486362 -  3q26.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01994  -     3q26.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01994 - 3q26.33 [CytoView hg19]  LINC01994 - 3q26.33 [CytoView hg38]
Mapping of homologs : NCBILINC01994 [Mapview hg19]  LINC01994 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127955
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01994
Cluster EST : UnigeneHs.591304 [ NCBI ]
CGAP (NCI)Hs.591304
Alternative Splicing GalleryENSG00000241098
Gene ExpressionLINC01994 [ NCBI-GEO ]   LINC01994 [ EBI - ARRAY_EXPRESS ]   LINC01994 [ SEEK ]   LINC01994 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01994 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401103
GTEX Portal (Tissue expression)LINC01994
Human Protein AtlasENSG00000241098-LINC01994 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01994
DMDM Disease mutations401103
Blocks (Seattle)LINC01994
Human Protein Atlas [tissue]ENSG00000241098-LINC01994 [tissue]
Protein Interaction databases
FunCoupENSG00000241098
BioGRIDLINC01994
STRING (EMBL)LINC01994
ZODIACLINC01994
Ontologies - Pathways
Huge Navigator LINC01994 [HugePedia]
snp3D : Map Gene to Disease401103
BioCentury BCIQLINC01994
ClinGenLINC01994
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401103
Clinical trialLINC01994
Miscellaneous
canSAR (ICR)LINC01994 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01994
EVEXLINC01994
GoPubMedLINC01994
iHOPLINC01994
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:38 CEST 2018

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