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LINC01995 (long intergenic non-protein coding RNA 1995)

Identity

Other alias-
HGNC (Hugo) LINC01995
LocusID (NCBI) 105374244
Atlas_Id 79228
Location 3q26.33  [Link to chromosome band 3q26]
Location_base_pair Starts at 182498290 and ends at 182507124 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01995   52828
Cards
Entrez_Gene (NCBI)LINC01995  105374244  long intergenic non-protein coding RNA 1995
Aliases
GeneCards (Weizmann)LINC01995
Ensembl hg19 (Hinxton)ENSG00000244247 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244247 [Gene_View]  ENSG00000244247 [Sequence]  chr3:182498290-182507124 [Contig_View]  LINC01995 [Vega]
ICGC DataPortalENSG00000244247
TCGA cBioPortalLINC01995
AceView (NCBI)LINC01995
Genatlas (Paris)LINC01995
WikiGenes105374244
SOURCE (Princeton)LINC01995
Genetics Home Reference (NIH)LINC01995
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01995  -     chr3:182498290-182507124 -  3q26.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01995  -     3q26.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01995 - 3q26.33 [CytoView hg19]  LINC01995 - 3q26.33 [CytoView hg38]
Mapping of homologs : NCBILINC01995 [Mapview hg19]  LINC01995 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX103371
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01995
Cluster EST : UnigeneHs.130176 [ NCBI ]
CGAP (NCI)Hs.130176
Alternative Splicing GalleryENSG00000244247
Gene ExpressionLINC01995 [ NCBI-GEO ]   LINC01995 [ EBI - ARRAY_EXPRESS ]   LINC01995 [ SEEK ]   LINC01995 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01995 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374244
GTEX Portal (Tissue expression)LINC01995
Human Protein AtlasENSG00000244247-LINC01995 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01995
DMDM Disease mutations105374244
Blocks (Seattle)LINC01995
Human Protein Atlas [tissue]ENSG00000244247-LINC01995 [tissue]
Protein Interaction databases
FunCoupENSG00000244247
BioGRIDLINC01995
STRING (EMBL)LINC01995
ZODIACLINC01995
Ontologies - Pathways
Huge Navigator LINC01995 [HugePedia]
snp3D : Map Gene to Disease105374244
BioCentury BCIQLINC01995
ClinGenLINC01995
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374244
Clinical trialLINC01995
Miscellaneous
canSAR (ICR)LINC01995 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01995
EVEXLINC01995
GoPubMedLINC01995
iHOPLINC01995
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:38 CEST 2018

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