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LINC01996 (long intergenic non-protein coding RNA 1996)

Identity

Other alias-
HGNC (Hugo) LINC01996
LocusID (NCBI) 400568
Atlas_Id 78920
Location 17p13.2  [Link to chromosome band 17p13]
Location_base_pair Starts at 4610449 and ends at 4617647 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01996   52830
Cards
Entrez_Gene (NCBI)LINC01996  400568  long intergenic non-protein coding RNA 1996
Aliases
GeneCards (Weizmann)LINC01996
Ensembl hg19 (Hinxton)ENSG00000261863 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261863 [Gene_View]  chr17:4610449-4617647 [Contig_View]  LINC01996 [Vega]
ICGC DataPortalENSG00000261863
TCGA cBioPortalLINC01996
AceView (NCBI)LINC01996
Genatlas (Paris)LINC01996
WikiGenes400568
SOURCE (Princeton)LINC01996
Genetics Home Reference (NIH)LINC01996
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01996  -     chr17:4610449-4617647 +  17p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01996  -     17p13.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01996 - 17p13.2 [CytoView hg19]  LINC01996 - 17p13.2 [CytoView hg38]
Mapping of homologs : NCBILINC01996 [Mapview hg19]  LINC01996 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043554
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01996
Cluster EST : UnigeneHs.434312 [ NCBI ]
CGAP (NCI)Hs.434312
Alternative Splicing GalleryENSG00000261863
Gene ExpressionLINC01996 [ NCBI-GEO ]   LINC01996 [ EBI - ARRAY_EXPRESS ]   LINC01996 [ SEEK ]   LINC01996 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01996 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400568
GTEX Portal (Tissue expression)LINC01996
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01996
DMDM Disease mutations400568
Blocks (Seattle)LINC01996
Human Protein AtlasENSG00000261863
IPIIPI00979813   
Protein Interaction databases
FunCoupENSG00000261863
BioGRIDLINC01996
STRING (EMBL)LINC01996
ZODIACLINC01996
Ontologies - Pathways
Huge Navigator LINC01996 [HugePedia]
snp3D : Map Gene to Disease400568
BioCentury BCIQLINC01996
ClinGenLINC01996
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400568
Clinical trialLINC01996
Miscellaneous
canSAR (ICR)LINC01996 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01996
EVEXLINC01996
GoPubMedLINC01996
iHOPLINC01996
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:40 CEST 2017

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