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LINC02001 (long intergenic non-protein coding RNA 2001)

Identity

Alias_symbol (synonym)RP11-1094M14.11
Other alias-
HGNC (Hugo) LINC02001
LocusID (NCBI) 105371743
Atlas_Id 79662
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 35568114 and ends at 35574313 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02001   52836
Cards
Entrez_Gene (NCBI)LINC02001  105371743  long intergenic non-protein coding RNA 2001
Aliases
GeneCards (Weizmann)LINC02001
Ensembl hg19 (Hinxton)ENSG00000267321 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267321 [Gene_View]  chr17:35568114-35574313 [Contig_View]  LINC02001 [Vega]
ICGC DataPortalENSG00000267321
TCGA cBioPortalLINC02001
AceView (NCBI)LINC02001
Genatlas (Paris)LINC02001
WikiGenes105371743
SOURCE (Princeton)LINC02001
Genetics Home Reference (NIH)LINC02001
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02001  -     chr17:35568114-35574313 +  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02001  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblLINC02001 - 17q12 [CytoView hg19]  LINC02001 - 17q12 [CytoView hg38]
Mapping of homologs : NCBILINC02001 [Mapview hg19]  LINC02001 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG189911 BQ213826 BU934121
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02001
Alternative Splicing GalleryENSG00000267321
Gene ExpressionLINC02001 [ NCBI-GEO ]   LINC02001 [ EBI - ARRAY_EXPRESS ]   LINC02001 [ SEEK ]   LINC02001 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02001 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371743
GTEX Portal (Tissue expression)LINC02001
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02001
DMDM Disease mutations105371743
Blocks (Seattle)LINC02001
Human Protein AtlasENSG00000267321
Protein Interaction databases
FunCoupENSG00000267321
BioGRIDLINC02001
STRING (EMBL)LINC02001
ZODIACLINC02001
Ontologies - Pathways
Huge Navigator LINC02001 [HugePedia]
snp3D : Map Gene to Disease105371743
BioCentury BCIQLINC02001
ClinGenLINC02001
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371743
Clinical trialLINC02001
Miscellaneous
canSAR (ICR)LINC02001 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02001
EVEXLINC02001
GoPubMedLINC02001
iHOPLINC02001
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:40 CEST 2017

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