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LINC02006 (long intergenic non-protein coding RNA 2006)

Identity

Other alias-
HGNC (Hugo) LINC02006
LocusID (NCBI) 105374165
Atlas_Id 79604
Location 3q25.2  [Link to chromosome band 3q25]
Location_base_pair Starts at 153383550 and ends at 153762526 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02006   52842
Cards
Entrez_Gene (NCBI)LINC02006  105374165  long intergenic non-protein coding RNA 2006
Aliases
GeneCards (Weizmann)LINC02006
Ensembl hg19 (Hinxton)ENSG00000238755 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238755 [Gene_View]  ENSG00000238755 [Sequence]  chr3:153383550-153762526 [Contig_View]  LINC02006 [Vega]
ICGC DataPortalENSG00000238755
TCGA cBioPortalLINC02006
AceView (NCBI)LINC02006
Genatlas (Paris)LINC02006
WikiGenes105374165
SOURCE (Princeton)LINC02006
Genetics Home Reference (NIH)LINC02006
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02006  -     chr3:153383550-153762526 -  3q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02006  -     3q25.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02006 - 3q25.2 [CytoView hg19]  LINC02006 - 3q25.2 [CytoView hg38]
Mapping of homologs : NCBILINC02006 [Mapview hg19]  LINC02006 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092619 BM909339
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02006
Cluster EST : UnigeneHs.638002 [ NCBI ]
CGAP (NCI)Hs.638002
Alternative Splicing GalleryENSG00000238755
Gene ExpressionLINC02006 [ NCBI-GEO ]   LINC02006 [ EBI - ARRAY_EXPRESS ]   LINC02006 [ SEEK ]   LINC02006 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02006 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374165
GTEX Portal (Tissue expression)LINC02006
Human Protein AtlasENSG00000238755-LINC02006 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02006
DMDM Disease mutations105374165
Blocks (Seattle)LINC02006
Human Protein Atlas [tissue]ENSG00000238755-LINC02006 [tissue]
Protein Interaction databases
FunCoupENSG00000238755
BioGRIDLINC02006
STRING (EMBL)LINC02006
ZODIACLINC02006
Ontologies - Pathways
Huge Navigator LINC02006 [HugePedia]
snp3D : Map Gene to Disease105374165
BioCentury BCIQLINC02006
ClinGenLINC02006
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374165
Clinical trialLINC02006
Miscellaneous
canSAR (ICR)LINC02006 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02006
EVEXLINC02006
GoPubMedLINC02006
iHOPLINC02006
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:40 CEST 2018

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