Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02015 (long intergenic non-protein coding RNA 2015)

Identity

Other aliasKCCAT211
HGNC (Hugo) LINC02015
LocusID (NCBI) 102724550
Atlas_Id 78827
Location 3q26.32  [Link to chromosome band 3q26]
Location_base_pair Starts at 177816865 and ends at 177899224 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02015   52850
Cards
Entrez_Gene (NCBI)LINC02015  102724550  long intergenic non-protein coding RNA 2015
AliasesKCCAT211
GeneCards (Weizmann)LINC02015
Ensembl hg19 (Hinxton)ENSG00000231574 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231574 [Gene_View]  ENSG00000231574 [Sequence]  chr3:177816865-177899224 [Contig_View]  LINC02015 [Vega]
ICGC DataPortalENSG00000231574
TCGA cBioPortalLINC02015
AceView (NCBI)LINC02015
Genatlas (Paris)LINC02015
WikiGenes102724550
SOURCE (Princeton)LINC02015
Genetics Home Reference (NIH)LINC02015
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02015  -     chr3:177816865-177899224 +  3q26.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02015  -     3q26.32   [Description]    (hg19-Feb_2009)
EnsemblLINC02015 - 3q26.32 [CytoView hg19]  LINC02015 - 3q26.32 [CytoView hg38]
Mapping of homologs : NCBILINC02015 [Mapview hg19]  LINC02015 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056252
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02015
Cluster EST : UnigeneHs.570526 [ NCBI ]
CGAP (NCI)Hs.570526
Alternative Splicing GalleryENSG00000231574
Gene ExpressionLINC02015 [ NCBI-GEO ]   LINC02015 [ EBI - ARRAY_EXPRESS ]   LINC02015 [ SEEK ]   LINC02015 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02015 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724550
GTEX Portal (Tissue expression)LINC02015
Human Protein AtlasENSG00000231574-LINC02015 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02015
DMDM Disease mutations102724550
Blocks (Seattle)LINC02015
Human Protein Atlas [tissue]ENSG00000231574-LINC02015 [tissue]
Protein Interaction databases
FunCoupENSG00000231574
BioGRIDLINC02015
STRING (EMBL)LINC02015
ZODIACLINC02015
Ontologies - Pathways
Huge Navigator LINC02015 [HugePedia]
snp3D : Map Gene to Disease102724550
BioCentury BCIQLINC02015
ClinGenLINC02015
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724550
Clinical trialLINC02015
Miscellaneous
canSAR (ICR)LINC02015 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02015
EVEXLINC02015
GoPubMedLINC02015
iHOPLINC02015
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:41 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.