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LINC02021 (long intergenic non-protein coding RNA 2021)

Identity

Other alias-
HGNC (Hugo) LINC02021
LocusID (NCBI) 105374104
Atlas_Id 78970
Location 3q22.1  [Link to chromosome band 3q22]
Location_base_pair Starts at 130111707 and ends at 130120569 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02021   52856
Cards
Entrez_Gene (NCBI)LINC02021  105374104  long intergenic non-protein coding RNA 2021
Aliases
GeneCards (Weizmann)LINC02021
Ensembl hg19 (Hinxton)ENSG00000249846 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249846 [Gene_View]  ENSG00000249846 [Sequence]  chr3:130111707-130120569 [Contig_View]  LINC02021 [Vega]
ICGC DataPortalENSG00000249846
TCGA cBioPortalLINC02021
AceView (NCBI)LINC02021
Genatlas (Paris)LINC02021
WikiGenes105374104
SOURCE (Princeton)LINC02021
Genetics Home Reference (NIH)LINC02021
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02021  -     chr3:130111707-130120569 +  3q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02021  -     3q22.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02021 - 3q22.1 [CytoView hg19]  LINC02021 - 3q22.1 [CytoView hg38]
Mapping of homologs : NCBILINC02021 [Mapview hg19]  LINC02021 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM972421 DA891486 HY061037
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02021
Cluster EST : UnigeneHs.698083 [ NCBI ]
CGAP (NCI)Hs.698083
Alternative Splicing GalleryENSG00000249846
Gene ExpressionLINC02021 [ NCBI-GEO ]   LINC02021 [ EBI - ARRAY_EXPRESS ]   LINC02021 [ SEEK ]   LINC02021 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02021 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374104
GTEX Portal (Tissue expression)LINC02021
Human Protein AtlasENSG00000249846-LINC02021 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02021
DMDM Disease mutations105374104
Blocks (Seattle)LINC02021
Human Protein Atlas [tissue]ENSG00000249846-LINC02021 [tissue]
Protein Interaction databases
FunCoupENSG00000249846
BioGRIDLINC02021
STRING (EMBL)LINC02021
ZODIACLINC02021
Ontologies - Pathways
Huge Navigator LINC02021 [HugePedia]
snp3D : Map Gene to Disease105374104
BioCentury BCIQLINC02021
ClinGenLINC02021
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374104
Clinical trialLINC02021
Miscellaneous
canSAR (ICR)LINC02021 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02021
EVEXLINC02021
GoPubMedLINC02021
iHOPLINC02021
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:42 CEST 2018

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