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LINC02025 (long intergenic non-protein coding RNA 2025)

Identity

Other alias-
HGNC (Hugo) LINC02025
LocusID (NCBI) 105377192
Atlas_Id 79152
Location 3p12.1  [Link to chromosome band 3p12]
Location_base_pair Starts at 84882090 and ends at 84893379 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02025   52860
Cards
Entrez_Gene (NCBI)LINC02025  105377192  long intergenic non-protein coding RNA 2025
Aliases
GeneCards (Weizmann)LINC02025
Ensembl hg19 (Hinxton)ENSG00000242339 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242339 [Gene_View]  ENSG00000242339 [Sequence]  chr3:84882090-84893379 [Contig_View]  LINC02025 [Vega]
ICGC DataPortalENSG00000242339
TCGA cBioPortalLINC02025
AceView (NCBI)LINC02025
Genatlas (Paris)LINC02025
WikiGenes105377192
SOURCE (Princeton)LINC02025
Genetics Home Reference (NIH)LINC02025
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02025  -     chr3:84882090-84893379 +  3p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02025  -     3p12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02025 - 3p12.1 [CytoView hg19]  LINC02025 - 3p12.1 [CytoView hg38]
Mapping of homologs : NCBILINC02025 [Mapview hg19]  LINC02025 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI028219
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02025
Alternative Splicing GalleryENSG00000242339
Gene ExpressionLINC02025 [ NCBI-GEO ]   LINC02025 [ EBI - ARRAY_EXPRESS ]   LINC02025 [ SEEK ]   LINC02025 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02025 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377192
GTEX Portal (Tissue expression)LINC02025
Human Protein AtlasENSG00000242339-LINC02025 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02025
DMDM Disease mutations105377192
Blocks (Seattle)LINC02025
Human Protein Atlas [tissue]ENSG00000242339-LINC02025 [tissue]
Protein Interaction databases
FunCoupENSG00000242339
BioGRIDLINC02025
STRING (EMBL)LINC02025
ZODIACLINC02025
Ontologies - Pathways
Huge Navigator LINC02025 [HugePedia]
snp3D : Map Gene to Disease105377192
BioCentury BCIQLINC02025
ClinGenLINC02025
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377192
Clinical trialLINC02025
Miscellaneous
canSAR (ICR)LINC02025 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02025
EVEXLINC02025
GoPubMedLINC02025
iHOPLINC02025
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:42 CEST 2018

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