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LINC02027 (long intergenic non-protein coding RNA 2027)

Identity

Other alias-
HGNC (Hugo) LINC02027
LocusID (NCBI) 728290
Atlas_Id 79272
Location 3p12.2  [Link to chromosome band 3p12]
Location_base_pair Starts at 80993868 and ends at 81095647 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02027   52862
Cards
Entrez_Gene (NCBI)LINC02027  728290  long intergenic non-protein coding RNA 2027
Aliases
GeneCards (Weizmann)LINC02027
Ensembl hg19 (Hinxton)ENSG00000243694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243694 [Gene_View]  ENSG00000243694 [Sequence]  chr3:80993868-81095647 [Contig_View]  LINC02027 [Vega]
ICGC DataPortalENSG00000243694
TCGA cBioPortalLINC02027
AceView (NCBI)LINC02027
Genatlas (Paris)LINC02027
WikiGenes728290
SOURCE (Princeton)LINC02027
Genetics Home Reference (NIH)LINC02027
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02027  -     chr3:80993868-81095647 +  3p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02027  -     3p12.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02027 - 3p12.2 [CytoView hg19]  LINC02027 - 3p12.2 [CytoView hg38]
Mapping of homologs : NCBILINC02027 [Mapview hg19]  LINC02027 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX106653 DA626616
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02027
Cluster EST : UnigeneHs.563132 [ NCBI ]
CGAP (NCI)Hs.563132
Alternative Splicing GalleryENSG00000243694
Gene ExpressionLINC02027 [ NCBI-GEO ]   LINC02027 [ EBI - ARRAY_EXPRESS ]   LINC02027 [ SEEK ]   LINC02027 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02027 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728290
GTEX Portal (Tissue expression)LINC02027
Human Protein AtlasENSG00000243694-LINC02027 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02027
DMDM Disease mutations728290
Blocks (Seattle)LINC02027
Human Protein Atlas [tissue]ENSG00000243694-LINC02027 [tissue]
Protein Interaction databases
FunCoupENSG00000243694
BioGRIDLINC02027
STRING (EMBL)LINC02027
ZODIACLINC02027
Ontologies - Pathways
Huge Navigator LINC02027 [HugePedia]
snp3D : Map Gene to Disease728290
BioCentury BCIQLINC02027
ClinGenLINC02027
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728290
Clinical trialLINC02027
Miscellaneous
canSAR (ICR)LINC02027 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02027
EVEXLINC02027
GoPubMedLINC02027
iHOPLINC02027
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:43 CEST 2018

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