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LINC02028 (long intergenic non-protein coding RNA 2028)

Identity

Other alias-
HGNC (Hugo) LINC02028
LocusID (NCBI) 285389
Atlas_Id 78964
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 194005456 and ends at 194070970 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02028   27718
Cards
Entrez_Gene (NCBI)LINC02028  285389  long intergenic non-protein coding RNA 2028
Aliases
GeneCards (Weizmann)LINC02028
Ensembl hg19 (Hinxton)ENSG00000230102 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230102 [Gene_View]  ENSG00000230102 [Sequence]  chr3:194005456-194070970 [Contig_View]  LINC02028 [Vega]
ICGC DataPortalENSG00000230102
TCGA cBioPortalLINC02028
AceView (NCBI)LINC02028
Genatlas (Paris)LINC02028
WikiGenes285389
SOURCE (Princeton)LINC02028
Genetics Home Reference (NIH)LINC02028
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02028  -     chr3:194005456-194070970 -  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02028  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblLINC02028 - 3q29 [CytoView hg19]  LINC02028 - 3q29 [CytoView hg38]
Mapping of homologs : NCBILINC02028 [Mapview hg19]  LINC02028 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI701578 AI818666 BC038368 BX096813
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02028
Cluster EST : UnigeneHs.634720 [ NCBI ]
CGAP (NCI)Hs.634720
Alternative Splicing GalleryENSG00000230102
Gene ExpressionLINC02028 [ NCBI-GEO ]   LINC02028 [ EBI - ARRAY_EXPRESS ]   LINC02028 [ SEEK ]   LINC02028 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02028 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285389
GTEX Portal (Tissue expression)LINC02028
Human Protein AtlasENSG00000230102-LINC02028 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02028
DMDM Disease mutations285389
Blocks (Seattle)LINC02028
Human Protein Atlas [tissue]ENSG00000230102-LINC02028 [tissue]
Protein Interaction databases
FunCoupENSG00000230102
BioGRIDLINC02028
STRING (EMBL)LINC02028
ZODIACLINC02028
Ontologies - Pathways
Huge Navigator LINC02028 [HugePedia]
snp3D : Map Gene to Disease285389
BioCentury BCIQLINC02028
ClinGenLINC02028
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285389
Clinical trialLINC02028
Miscellaneous
canSAR (ICR)LINC02028 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02028
EVEXLINC02028
GoPubMedLINC02028
iHOPLINC02028
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:43 CEST 2018

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