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LINC02029 (long intergenic non-protein coding RNA 2029)

Identity

Other alias-
HGNC (Hugo) LINC02029
LocusID (NCBI) 105374177
Atlas_Id 80074
Location 3q25.31  [Link to chromosome band 3q25]
Location_base_pair Starts at 157081841 and ends at 157088547 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02029   52863
Cards
Entrez_Gene (NCBI)LINC02029  105374177  long intergenic non-protein coding RNA 2029
Aliases
GeneCards (Weizmann)LINC02029
Ensembl hg19 (Hinxton)ENSG00000241544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241544 [Gene_View]  ENSG00000241544 [Sequence]  chr3:157081841-157088547 [Contig_View]  LINC02029 [Vega]
ICGC DataPortalENSG00000241544
TCGA cBioPortalLINC02029
AceView (NCBI)LINC02029
Genatlas (Paris)LINC02029
WikiGenes105374177
SOURCE (Princeton)LINC02029
Genetics Home Reference (NIH)LINC02029
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02029  -     chr3:157081841-157088547 +  3q25.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02029  -     3q25.31   [Description]    (hg19-Feb_2009)
EnsemblLINC02029 - 3q25.31 [CytoView hg19]  LINC02029 - 3q25.31 [CytoView hg38]
Mapping of homologs : NCBILINC02029 [Mapview hg19]  LINC02029 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038760 DB507682
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02029
Cluster EST : UnigeneHs.634263 [ NCBI ]
CGAP (NCI)Hs.634263
Alternative Splicing GalleryENSG00000241544
Gene ExpressionLINC02029 [ NCBI-GEO ]   LINC02029 [ EBI - ARRAY_EXPRESS ]   LINC02029 [ SEEK ]   LINC02029 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02029 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374177
GTEX Portal (Tissue expression)LINC02029
Human Protein AtlasENSG00000241544-LINC02029 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02029
DMDM Disease mutations105374177
Blocks (Seattle)LINC02029
Human Protein Atlas [tissue]ENSG00000241544-LINC02029 [tissue]
Protein Interaction databases
FunCoupENSG00000241544
BioGRIDLINC02029
STRING (EMBL)LINC02029
ZODIACLINC02029
Ontologies - Pathways
Huge Navigator LINC02029 [HugePedia]
snp3D : Map Gene to Disease105374177
BioCentury BCIQLINC02029
ClinGenLINC02029
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374177
Clinical trialLINC02029
Miscellaneous
canSAR (ICR)LINC02029 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02029
EVEXLINC02029
GoPubMedLINC02029
iHOPLINC02029
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:43 CEST 2018

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