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LINC02038 (long intergenic non-protein coding RNA 2038)

Identity

Other alias-
HGNC (Hugo) LINC02038
LocusID (NCBI) 105374285
Atlas_Id 79440
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 193840828 and ends at 193844009 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02038   52878
Cards
Entrez_Gene (NCBI)LINC02038  105374285  long intergenic non-protein coding RNA 2038
Aliases
GeneCards (Weizmann)LINC02038
Ensembl hg19 (Hinxton)ENSG00000229155 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229155 [Gene_View]  ENSG00000229155 [Sequence]  chr3:193840828-193844009 [Contig_View]  LINC02038 [Vega]
ICGC DataPortalENSG00000229155
TCGA cBioPortalLINC02038
AceView (NCBI)LINC02038
Genatlas (Paris)LINC02038
WikiGenes105374285
SOURCE (Princeton)LINC02038
Genetics Home Reference (NIH)LINC02038
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02038  -     chr3:193840828-193844009 -  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02038  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblLINC02038 - 3q29 [CytoView hg19]  LINC02038 - 3q29 [CytoView hg38]
Mapping of homologs : NCBILINC02038 [Mapview hg19]  LINC02038 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091265 DA448638
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02038
Cluster EST : UnigeneHs.552531 [ NCBI ]
CGAP (NCI)Hs.552531
Alternative Splicing GalleryENSG00000229155
Gene ExpressionLINC02038 [ NCBI-GEO ]   LINC02038 [ EBI - ARRAY_EXPRESS ]   LINC02038 [ SEEK ]   LINC02038 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02038 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374285
GTEX Portal (Tissue expression)LINC02038
Human Protein AtlasENSG00000229155-LINC02038 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02038
DMDM Disease mutations105374285
Blocks (Seattle)LINC02038
Human Protein Atlas [tissue]ENSG00000229155-LINC02038 [tissue]
Protein Interaction databases
FunCoupENSG00000229155
BioGRIDLINC02038
STRING (EMBL)LINC02038
ZODIACLINC02038
Ontologies - Pathways
Huge Navigator LINC02038 [HugePedia]
snp3D : Map Gene to Disease105374285
BioCentury BCIQLINC02038
ClinGenLINC02038
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374285
Clinical trialLINC02038
Miscellaneous
canSAR (ICR)LINC02038 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02038
EVEXLINC02038
GoPubMedLINC02038
iHOPLINC02038
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:45 CEST 2018

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