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LINC02041 (long intergenic non-protein coding RNA 2041)

Identity

Other alias-
HGNC (Hugo) LINC02041
LocusID (NCBI) 105374261
Atlas_Id 79351
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 187447046 and ends at 187449949 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02041   52881
Cards
Entrez_Gene (NCBI)LINC02041  105374261  long intergenic non-protein coding RNA 2041
Aliases
GeneCards (Weizmann)LINC02041
Ensembl hg19 (Hinxton)ENSG00000228952 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228952 [Gene_View]  ENSG00000228952 [Sequence]  chr3:187447046-187449949 [Contig_View]  LINC02041 [Vega]
ICGC DataPortalENSG00000228952
TCGA cBioPortalLINC02041
AceView (NCBI)LINC02041
Genatlas (Paris)LINC02041
WikiGenes105374261
SOURCE (Princeton)LINC02041
Genetics Home Reference (NIH)LINC02041
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02041  -     chr3:187447046-187449949 +  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02041  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02041 - 3q27.3 [CytoView hg19]  LINC02041 - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBILINC02041 [Mapview hg19]  LINC02041 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI948490 BG205610
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02041
Cluster EST : UnigeneHs.535726 [ NCBI ]
CGAP (NCI)Hs.535726
Alternative Splicing GalleryENSG00000228952
Gene ExpressionLINC02041 [ NCBI-GEO ]   LINC02041 [ EBI - ARRAY_EXPRESS ]   LINC02041 [ SEEK ]   LINC02041 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02041 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374261
GTEX Portal (Tissue expression)LINC02041
Human Protein AtlasENSG00000228952-LINC02041 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02041
DMDM Disease mutations105374261
Blocks (Seattle)LINC02041
Human Protein Atlas [tissue]ENSG00000228952-LINC02041 [tissue]
Protein Interaction databases
FunCoupENSG00000228952
BioGRIDLINC02041
STRING (EMBL)LINC02041
ZODIACLINC02041
Ontologies - Pathways
Huge Navigator LINC02041 [HugePedia]
snp3D : Map Gene to Disease105374261
BioCentury BCIQLINC02041
ClinGenLINC02041
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374261
Clinical trialLINC02041
Miscellaneous
canSAR (ICR)LINC02041 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02041
EVEXLINC02041
GoPubMedLINC02041
iHOPLINC02041
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:45 CEST 2018

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