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LINC02042 (long intergenic non-protein coding RNA 2042)

Identity

Other alias-
HGNC (Hugo) LINC02042
LocusID (NCBI) 101929694
Atlas_Id 80058
Location 3q13.2  [Link to chromosome band 3q13]
Location_base_pair Starts at 112736449 and ends at 112749319 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02042   52882
Cards
Entrez_Gene (NCBI)LINC02042  101929694  long intergenic non-protein coding RNA 2042
Aliases
GeneCards (Weizmann)LINC02042
Ensembl hg19 (Hinxton)ENSG00000240893 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240893 [Gene_View]  ENSG00000240893 [Sequence]  chr3:112736449-112749319 [Contig_View]  LINC02042 [Vega]
ICGC DataPortalENSG00000240893
TCGA cBioPortalLINC02042
AceView (NCBI)LINC02042
Genatlas (Paris)LINC02042
WikiGenes101929694
SOURCE (Princeton)LINC02042
Genetics Home Reference (NIH)LINC02042
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02042  -     chr3:112736449-112749319 -  3q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02042  -     3q13.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02042 - 3q13.2 [CytoView hg19]  LINC02042 - 3q13.2 [CytoView hg38]
Mapping of homologs : NCBILINC02042 [Mapview hg19]  LINC02042 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033333
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02042
Cluster EST : UnigeneHs.385630 [ NCBI ]
CGAP (NCI)Hs.385630
Alternative Splicing GalleryENSG00000240893
Gene ExpressionLINC02042 [ NCBI-GEO ]   LINC02042 [ EBI - ARRAY_EXPRESS ]   LINC02042 [ SEEK ]   LINC02042 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02042 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929694
GTEX Portal (Tissue expression)LINC02042
Human Protein AtlasENSG00000240893-LINC02042 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02042
DMDM Disease mutations101929694
Blocks (Seattle)LINC02042
Human Protein Atlas [tissue]ENSG00000240893-LINC02042 [tissue]
Protein Interaction databases
FunCoupENSG00000240893
BioGRIDLINC02042
STRING (EMBL)LINC02042
ZODIACLINC02042
Ontologies - Pathways
Huge Navigator LINC02042 [HugePedia]
snp3D : Map Gene to Disease101929694
BioCentury BCIQLINC02042
ClinGenLINC02042
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929694
Clinical trialLINC02042
Miscellaneous
canSAR (ICR)LINC02042 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02042
EVEXLINC02042
GoPubMedLINC02042
iHOPLINC02042
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:45 CEST 2018

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