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LINC02052 (long intergenic non-protein coding RNA 2052)

Identity

Other alias-
HGNC (Hugo) LINC02052
LocusID (NCBI) 253573
Atlas_Id 79367
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 186454981 and ends at 186493661 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02052   27372
Cards
Entrez_Gene (NCBI)LINC02052  253573  long intergenic non-protein coding RNA 2052
Aliases
GeneCards (Weizmann)LINC02052
Ensembl hg19 (Hinxton)ENSG00000224406 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224406 [Gene_View]  ENSG00000224406 [Sequence]  chr3:186454981-186493661 [Contig_View]  LINC02052 [Vega]
ICGC DataPortalENSG00000224406
TCGA cBioPortalLINC02052
AceView (NCBI)LINC02052
Genatlas (Paris)LINC02052
WikiGenes253573
SOURCE (Princeton)LINC02052
Genetics Home Reference (NIH)LINC02052
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02052  -     chr3:186454981-186493661 -  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02052  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02052 - 3q27.3 [CytoView hg19]  LINC02052 - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBILINC02052 [Mapview hg19]  LINC02052 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA781147 AK057297
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02052
Cluster EST : UnigeneHs.97386 [ NCBI ]
CGAP (NCI)Hs.97386
Alternative Splicing GalleryENSG00000224406
Gene ExpressionLINC02052 [ NCBI-GEO ]   LINC02052 [ EBI - ARRAY_EXPRESS ]   LINC02052 [ SEEK ]   LINC02052 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02052 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)253573
GTEX Portal (Tissue expression)LINC02052
Human Protein AtlasENSG00000224406-LINC02052 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02052
DMDM Disease mutations253573
Blocks (Seattle)LINC02052
Human Protein Atlas [tissue]ENSG00000224406-LINC02052 [tissue]
Protein Interaction databases
FunCoupENSG00000224406
BioGRIDLINC02052
STRING (EMBL)LINC02052
ZODIACLINC02052
Ontologies - Pathways
Huge Navigator LINC02052 [HugePedia]
snp3D : Map Gene to Disease253573
BioCentury BCIQLINC02052
ClinGenLINC02052
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD253573
Clinical trialLINC02052
Miscellaneous
canSAR (ICR)LINC02052 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02052
EVEXLINC02052
GoPubMedLINC02052
iHOPLINC02052
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:47 CEST 2018

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