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LINC02056 (long intergenic non-protein coding RNA 2056)

Identity

Other alias-
HGNC (Hugo) LINC02056
LocusID (NCBI) 102477328
Atlas_Id 79200
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 72574075 and ends at 72660669 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02056   52898
Cards
Entrez_Gene (NCBI)LINC02056  102477328  long intergenic non-protein coding RNA 2056
Aliases
GeneCards (Weizmann)LINC02056
Ensembl hg19 (Hinxton)ENSG00000248371 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248371 [Gene_View]  ENSG00000248371 [Sequence]  chr5:72574075-72660669 [Contig_View]  LINC02056 [Vega]
ICGC DataPortalENSG00000248371
TCGA cBioPortalLINC02056
AceView (NCBI)LINC02056
Genatlas (Paris)LINC02056
WikiGenes102477328
SOURCE (Princeton)LINC02056
Genetics Home Reference (NIH)LINC02056
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02056  -     chr5:72574075-72660669 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02056  -     5q13.2   [Description]    (hg19-Feb_2009)
LINC02056 - 5q13.2 [CytoView hg19]  LINC02056 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBILINC02056 [Mapview hg19]  LINC02056 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI911715
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02056
Cluster EST : UnigeneHs.254516 [ NCBI ]
CGAP (NCI)Hs.254516
Alternative Splicing GalleryENSG00000248371
Gene ExpressionLINC02056 [ NCBI-GEO ]   LINC02056 [ EBI - ARRAY_EXPRESS ]   LINC02056 [ SEEK ]   LINC02056 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02056 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102477328
GTEX Portal (Tissue expression)LINC02056
Human Protein AtlasENSG00000248371-LINC02056 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02056
DMDM Disease mutations102477328
Blocks (Seattle)LINC02056
Human Protein Atlas [tissue]ENSG00000248371-LINC02056 [tissue]
Protein Interaction databases
FunCoupENSG00000248371
BioGRIDLINC02056
STRING (EMBL)LINC02056
ZODIACLINC02056
Ontologies - Pathways
Huge Navigator LINC02056 [HugePedia]
snp3D : Map Gene to Disease102477328
BioCentury BCIQLINC02056
ClinGenLINC02056
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102477328
Clinical trialLINC02056
Miscellaneous
canSAR (ICR)LINC02056 (select the gene name)
DataMed IndexLINC02056
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02056
EVEXLINC02056
GoPubMedLINC02056
iHOPLINC02056
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:42 CEST 2019

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