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LINC02057 (long intergenic non-protein coding RNA 2057)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02057
LocusID (NCBI) 105378992
Atlas_Id 78869
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 61250561 and ends at 61264929 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC02057   52900
Cards
Entrez_Gene (NCBI)LINC02057    long intergenic non-protein coding RNA 2057
Aliases
GeneCards (Weizmann)LINC02057
Ensembl hg19 (Hinxton)ENSG00000249279 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249279 [Gene_View]  ENSG00000249279 [Sequence]  chr5:61250561-61264929 [Contig_View]  LINC02057 [Vega]
ICGC DataPortalENSG00000249279
TCGA cBioPortalLINC02057
AceView (NCBI)LINC02057
Genatlas (Paris)LINC02057
SOURCE (Princeton)LINC02057
Genetics Home Reference (NIH)LINC02057
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02057  -     chr5:61250561-61264929 -  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02057  -     5q12.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02057 - 5q12.1 [CytoView hg19]  LINC02057 - 5q12.1 [CytoView hg38]
ImmunoBaseENSG00000249279
Genome Data Viewer NCBILINC02057 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BU679034 OA988375
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02057
Gene ExpressionLINC02057 [ NCBI-GEO ]   LINC02057 [ EBI - ARRAY_EXPRESS ]   LINC02057 [ SEEK ]   LINC02057 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02057 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02057 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105378992
GTEX Portal (Tissue expression)LINC02057
Human Protein AtlasENSG00000249279-LINC02057 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02057
Human Protein Atlas [tissue]ENSG00000249279-LINC02057 [tissue]
Protein Interaction databases
BioGRIDLINC02057
STRING (EMBL)LINC02057
ZODIACLINC02057
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC02057
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:59:25 CEST 2021

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