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LINC02057 (long intergenic non-protein coding RNA 2057)

Identity

Other alias-
HGNC (Hugo) LINC02057
LocusID (NCBI) 105378992
Atlas_Id 78869
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 61250561 and ends at 61264929 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02057   52900
Cards
Entrez_Gene (NCBI)LINC02057  105378992  long intergenic non-protein coding RNA 2057
Aliases
GeneCards (Weizmann)LINC02057
Ensembl hg19 (Hinxton)ENSG00000249279 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249279 [Gene_View]  ENSG00000249279 [Sequence]  chr5:61250561-61264929 [Contig_View]  LINC02057 [Vega]
ICGC DataPortalENSG00000249279
TCGA cBioPortalLINC02057
AceView (NCBI)LINC02057
Genatlas (Paris)LINC02057
WikiGenes105378992
SOURCE (Princeton)LINC02057
Genetics Home Reference (NIH)LINC02057
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02057  -     chr5:61250561-61264929 -  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02057  -     5q12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02057 - 5q12.1 [CytoView hg19]  LINC02057 - 5q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC02057 [Mapview hg19]  LINC02057 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU679034
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02057
Cluster EST : UnigeneHs.621682 [ NCBI ]
CGAP (NCI)Hs.621682
Alternative Splicing GalleryENSG00000249279
Gene ExpressionLINC02057 [ NCBI-GEO ]   LINC02057 [ EBI - ARRAY_EXPRESS ]   LINC02057 [ SEEK ]   LINC02057 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02057 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378992
GTEX Portal (Tissue expression)LINC02057
Human Protein AtlasENSG00000249279-LINC02057 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02057
DMDM Disease mutations105378992
Blocks (Seattle)LINC02057
Human Protein Atlas [tissue]ENSG00000249279-LINC02057 [tissue]
Protein Interaction databases
FunCoupENSG00000249279
BioGRIDLINC02057
STRING (EMBL)LINC02057
ZODIACLINC02057
Ontologies - Pathways
Huge Navigator LINC02057 [HugePedia]
snp3D : Map Gene to Disease105378992
BioCentury BCIQLINC02057
ClinGenLINC02057
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378992
Clinical trialLINC02057
Miscellaneous
canSAR (ICR)LINC02057 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02057
EVEXLINC02057
GoPubMedLINC02057
iHOPLINC02057
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 13:56:48 CEST 2018

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