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LINC02059 (long intergenic non-protein coding RNA 2059)

Identity

Other alias-
HGNC (Hugo) LINC02059
LocusID (NCBI) 100505878
Atlas_Id 79374
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 86746818 and ends at 86749772 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02059   52902
Cards
Entrez_Gene (NCBI)LINC02059  100505878  long intergenic non-protein coding RNA 2059
Aliases
GeneCards (Weizmann)LINC02059
Ensembl hg19 (Hinxton)ENSG00000250544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250544 [Gene_View]  ENSG00000250544 [Sequence]  chr5:86746818-86749772 [Contig_View]  LINC02059 [Vega]
ICGC DataPortalENSG00000250544
TCGA cBioPortalLINC02059
AceView (NCBI)LINC02059
Genatlas (Paris)LINC02059
WikiGenes100505878
SOURCE (Princeton)LINC02059
Genetics Home Reference (NIH)LINC02059
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02059  -     chr5:86746818-86749772 +  5q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02059  -     5q14.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02059 - 5q14.3 [CytoView hg19]  LINC02059 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBILINC02059 [Mapview hg19]  LINC02059 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW070230 BC041393
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02059
Cluster EST : UnigeneHs.246405 [ NCBI ]
CGAP (NCI)Hs.246405
Alternative Splicing GalleryENSG00000250544
Gene ExpressionLINC02059 [ NCBI-GEO ]   LINC02059 [ EBI - ARRAY_EXPRESS ]   LINC02059 [ SEEK ]   LINC02059 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02059 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505878
GTEX Portal (Tissue expression)LINC02059
Human Protein AtlasENSG00000250544-LINC02059 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02059
DMDM Disease mutations100505878
Blocks (Seattle)LINC02059
Human Protein Atlas [tissue]ENSG00000250544-LINC02059 [tissue]
Protein Interaction databases
FunCoupENSG00000250544
BioGRIDLINC02059
STRING (EMBL)LINC02059
ZODIACLINC02059
Ontologies - Pathways
Huge Navigator LINC02059 [HugePedia]
snp3D : Map Gene to Disease100505878
BioCentury BCIQLINC02059
ClinGenLINC02059
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505878
Clinical trialLINC02059
Miscellaneous
canSAR (ICR)LINC02059 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02059
EVEXLINC02059
GoPubMedLINC02059
iHOPLINC02059
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:48 CEST 2018

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