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LINC02060 (long intergenic non-protein coding RNA 2060)

Identity

Other alias-
HGNC (Hugo) LINC02060
LocusID (NCBI) 102546226
Atlas_Id 79151
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 88408982 and ends at 88439090 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02060   52904
Cards
Entrez_Gene (NCBI)LINC02060  102546226  long intergenic non-protein coding RNA 2060
Aliases
GeneCards (Weizmann)LINC02060
Ensembl hg19 (Hinxton)ENSG00000250156 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250156 [Gene_View]  ENSG00000250156 [Sequence]  chr5:88408982-88439090 [Contig_View]  LINC02060 [Vega]
ICGC DataPortalENSG00000250156
TCGA cBioPortalLINC02060
AceView (NCBI)LINC02060
Genatlas (Paris)LINC02060
WikiGenes102546226
SOURCE (Princeton)LINC02060
Genetics Home Reference (NIH)LINC02060
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02060  -     chr5:88408982-88439090 -  5q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02060  -     5q14.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02060 - 5q14.3 [CytoView hg19]  LINC02060 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBILINC02060 [Mapview hg19]  LINC02060 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043237
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02060
Cluster EST : UnigeneHs.535810 [ NCBI ]
CGAP (NCI)Hs.535810
Alternative Splicing GalleryENSG00000250156
Gene ExpressionLINC02060 [ NCBI-GEO ]   LINC02060 [ EBI - ARRAY_EXPRESS ]   LINC02060 [ SEEK ]   LINC02060 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02060 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102546226
GTEX Portal (Tissue expression)LINC02060
Human Protein AtlasENSG00000250156-LINC02060 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02060
DMDM Disease mutations102546226
Blocks (Seattle)LINC02060
Human Protein Atlas [tissue]ENSG00000250156-LINC02060 [tissue]
Protein Interaction databases
FunCoupENSG00000250156
BioGRIDLINC02060
STRING (EMBL)LINC02060
ZODIACLINC02060
Ontologies - Pathways
Huge Navigator LINC02060 [HugePedia]
snp3D : Map Gene to Disease102546226
BioCentury BCIQLINC02060
ClinGenLINC02060
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102546226
Clinical trialLINC02060
Miscellaneous
canSAR (ICR)LINC02060 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02060
EVEXLINC02060
GoPubMedLINC02060
iHOPLINC02060
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:48 CEST 2018

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