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LINC02062 (long intergenic non-protein coding RNA 2062)

Identity

Other alias-
HGNC (Hugo) LINC02062
LocusID (NCBI) 102724810
Atlas_Id 79786
Location 5q21.1  [Link to chromosome band 5q21]
Location_base_pair Starts at 98987439 and ends at 98987467 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02062   52907
Cards
Entrez_Gene (NCBI)LINC02062  102724810  long intergenic non-protein coding RNA 2062
Aliases
GeneCards (Weizmann)LINC02062
Ensembl hg19 (Hinxton)ENSG00000248489 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248489 [Gene_View]  ENSG00000248489 [Sequence]  chr5:98987439-98987467 [Contig_View]  LINC02062 [Vega]
ICGC DataPortalENSG00000248489
TCGA cBioPortalLINC02062
AceView (NCBI)LINC02062
Genatlas (Paris)LINC02062
WikiGenes102724810
SOURCE (Princeton)LINC02062
Genetics Home Reference (NIH)LINC02062
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02062  -     chr5:98987439-98987467 +  5q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02062  -     5q21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02062 - 5q21.1 [CytoView hg19]  LINC02062 - 5q21.1 [CytoView hg38]
Mapping of homologs : NCBILINC02062 [Mapview hg19]  LINC02062 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DQ583806
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02062
Alternative Splicing GalleryENSG00000248489
Gene ExpressionLINC02062 [ NCBI-GEO ]   LINC02062 [ EBI - ARRAY_EXPRESS ]   LINC02062 [ SEEK ]   LINC02062 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02062 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724810
GTEX Portal (Tissue expression)LINC02062
Human Protein AtlasENSG00000248489-LINC02062 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02062
DMDM Disease mutations102724810
Blocks (Seattle)LINC02062
Human Protein Atlas [tissue]ENSG00000248489-LINC02062 [tissue]
Protein Interaction databases
FunCoupENSG00000248489
BioGRIDLINC02062
STRING (EMBL)LINC02062
ZODIACLINC02062
Ontologies - Pathways
Huge Navigator LINC02062 [HugePedia]
snp3D : Map Gene to Disease102724810
BioCentury BCIQLINC02062
ClinGenLINC02062
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724810
Clinical trialLINC02062
Miscellaneous
canSAR (ICR)LINC02062 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02062
EVEXLINC02062
GoPubMedLINC02062
iHOPLINC02062
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:48 CEST 2018

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