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LINC02068 (long intergenic non-protein coding RNA 2068)

Identity

Other alias-
HGNC (Hugo) LINC02068
LocusID (NCBI) 105374219
Atlas_Id 80101
Location 3q26.31  [Link to chromosome band 3q26]
Location_base_pair Starts at 172560901 and ends at 172595607 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02068   52914
Cards
Entrez_Gene (NCBI)LINC02068  105374219  long intergenic non-protein coding RNA 2068
Aliases
GeneCards (Weizmann)LINC02068
Ensembl hg19 (Hinxton)ENSG00000223387 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223387 [Gene_View]  ENSG00000223387 [Sequence]  chr3:172560901-172595607 [Contig_View]  LINC02068 [Vega]
ICGC DataPortalENSG00000223387
TCGA cBioPortalLINC02068
AceView (NCBI)LINC02068
Genatlas (Paris)LINC02068
WikiGenes105374219
SOURCE (Princeton)LINC02068
Genetics Home Reference (NIH)LINC02068
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02068  -     chr3:172560901-172595607 -  3q26.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02068  -     3q26.31   [Description]    (hg19-Feb_2009)
EnsemblLINC02068 - 3q26.31 [CytoView hg19]  LINC02068 - 3q26.31 [CytoView hg38]
Mapping of homologs : NCBILINC02068 [Mapview hg19]  LINC02068 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI478104 BX096391
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02068
Cluster EST : UnigeneHs.186269 [ NCBI ]
CGAP (NCI)Hs.186269
Alternative Splicing GalleryENSG00000223387
Gene ExpressionLINC02068 [ NCBI-GEO ]   LINC02068 [ EBI - ARRAY_EXPRESS ]   LINC02068 [ SEEK ]   LINC02068 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02068 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374219
GTEX Portal (Tissue expression)LINC02068
Human Protein AtlasENSG00000223387-LINC02068 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02068
DMDM Disease mutations105374219
Blocks (Seattle)LINC02068
Human Protein Atlas [tissue]ENSG00000223387-LINC02068 [tissue]
Protein Interaction databases
FunCoupENSG00000223387
BioGRIDLINC02068
STRING (EMBL)LINC02068
ZODIACLINC02068
Ontologies - Pathways
Huge Navigator LINC02068 [HugePedia]
snp3D : Map Gene to Disease105374219
BioCentury BCIQLINC02068
ClinGenLINC02068
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374219
Clinical trialLINC02068
Miscellaneous
canSAR (ICR)LINC02068 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02068
EVEXLINC02068
GoPubMedLINC02068
iHOPLINC02068
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:49 CEST 2018

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