Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02069 (long intergenic non-protein coding RNA 2069)

Identity

Other alias-
HGNC (Hugo) LINC02069
LocusID (NCBI) 101928992
Atlas_Id 79782
Location 3q27.1  [Link to chromosome band 3q27]
Location_base_pair Starts at 184756389 and ends at 184773155 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02069   52915
Cards
Entrez_Gene (NCBI)LINC02069  101928992  long intergenic non-protein coding RNA 2069
Aliases
GeneCards (Weizmann)LINC02069
Ensembl hg19 (Hinxton)ENSG00000229433 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229433 [Gene_View]  ENSG00000229433 [Sequence]  chr3:184756389-184773155 [Contig_View]  LINC02069 [Vega]
ICGC DataPortalENSG00000229433
TCGA cBioPortalLINC02069
AceView (NCBI)LINC02069
Genatlas (Paris)LINC02069
WikiGenes101928992
SOURCE (Princeton)LINC02069
Genetics Home Reference (NIH)LINC02069
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02069  -     chr3:184756389-184773155 -  3q27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02069  -     3q27.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02069 - 3q27.1 [CytoView hg19]  LINC02069 - 3q27.1 [CytoView hg38]
Mapping of homologs : NCBILINC02069 [Mapview hg19]  LINC02069 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC050282
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02069
Cluster EST : UnigeneHs.507129 [ NCBI ]
CGAP (NCI)Hs.507129
Alternative Splicing GalleryENSG00000229433
Gene ExpressionLINC02069 [ NCBI-GEO ]   LINC02069 [ EBI - ARRAY_EXPRESS ]   LINC02069 [ SEEK ]   LINC02069 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02069 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928992
GTEX Portal (Tissue expression)LINC02069
Human Protein AtlasENSG00000229433-LINC02069 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02069
DMDM Disease mutations101928992
Blocks (Seattle)LINC02069
Human Protein Atlas [tissue]ENSG00000229433-LINC02069 [tissue]
Protein Interaction databases
FunCoupENSG00000229433
BioGRIDLINC02069
STRING (EMBL)LINC02069
ZODIACLINC02069
Ontologies - Pathways
Huge Navigator LINC02069 [HugePedia]
snp3D : Map Gene to Disease101928992
BioCentury BCIQLINC02069
ClinGenLINC02069
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928992
Clinical trialLINC02069
Miscellaneous
canSAR (ICR)LINC02069 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02069
EVEXLINC02069
GoPubMedLINC02069
iHOPLINC02069
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:49 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.