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LINC02072 (long intergenic non-protein coding RNA 2072)

Identity

Other alias-
HGNC (Hugo) LINC02072
LocusID (NCBI) 440446
Atlas_Id 79380
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 51336715 and ends at 51342571 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02072   52918
Cards
Entrez_Gene (NCBI)LINC02072  440446  long intergenic non-protein coding RNA 2072
Aliases
GeneCards (Weizmann)LINC02072
Ensembl hg19 (Hinxton)ENSG00000225860 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225860 [Gene_View]  chr17:51336715-51342571 [Contig_View]  LINC02072 [Vega]
ICGC DataPortalENSG00000225860
TCGA cBioPortalLINC02072
AceView (NCBI)LINC02072
Genatlas (Paris)LINC02072
WikiGenes440446
SOURCE (Princeton)LINC02072
Genetics Home Reference (NIH)LINC02072
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02072  -     chr17:51336715-51342571 +  17q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02072  -     17q21.33   [Description]    (hg19-Feb_2009)
EnsemblLINC02072 - 17q21.33 [CytoView hg19]  LINC02072 - 17q21.33 [CytoView hg38]
Mapping of homologs : NCBILINC02072 [Mapview hg19]  LINC02072 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124832 BC132910
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02072
Cluster EST : UnigeneHs.626751 [ NCBI ]
CGAP (NCI)Hs.626751
Alternative Splicing GalleryENSG00000225860
Gene ExpressionLINC02072 [ NCBI-GEO ]   LINC02072 [ EBI - ARRAY_EXPRESS ]   LINC02072 [ SEEK ]   LINC02072 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02072 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440446
GTEX Portal (Tissue expression)LINC02072
Human Protein AtlasENSG00000225860-LINC02072 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02072
DMDM Disease mutations440446
Blocks (Seattle)LINC02072
Human Protein Atlas [tissue]ENSG00000225860-LINC02072 [tissue]
IPIIPI00446095   
Protein Interaction databases
FunCoupENSG00000225860
BioGRIDLINC02072
STRING (EMBL)LINC02072
ZODIACLINC02072
Ontologies - Pathways
Huge Navigator LINC02072 [HugePedia]
snp3D : Map Gene to Disease440446
BioCentury BCIQLINC02072
ClinGenLINC02072
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440446
Clinical trialLINC02072
Miscellaneous
canSAR (ICR)LINC02072 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02072
EVEXLINC02072
GoPubMedLINC02072
iHOPLINC02072
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:35:51 CET 2017

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