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LINC02077 (long intergenic non-protein coding RNA 2077)

Identity

Other alias-
HGNC (Hugo) LINC02077
LocusID (NCBI) 105377172
Atlas_Id 78841
Location 3p12.3  [Link to chromosome band 3p12]
Location_base_pair Starts at 78038705 and ends at 78048963 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02077   52925
Cards
Entrez_Gene (NCBI)LINC02077  105377172  long intergenic non-protein coding RNA 2077
Aliases
GeneCards (Weizmann)LINC02077
Ensembl hg19 (Hinxton)ENSG00000244461 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244461 [Gene_View]  ENSG00000244461 [Sequence]  chr3:78038705-78048963 [Contig_View]  LINC02077 [Vega]
ICGC DataPortalENSG00000244461
TCGA cBioPortalLINC02077
AceView (NCBI)LINC02077
Genatlas (Paris)LINC02077
WikiGenes105377172
SOURCE (Princeton)LINC02077
Genetics Home Reference (NIH)LINC02077
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02077  -     chr3:78038705-78048963 -  3p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02077  -     3p12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02077 - 3p12.3 [CytoView hg19]  LINC02077 - 3p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC02077 [Mapview hg19]  LINC02077 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02077
Alternative Splicing GalleryENSG00000244461
Gene ExpressionLINC02077 [ NCBI-GEO ]   LINC02077 [ EBI - ARRAY_EXPRESS ]   LINC02077 [ SEEK ]   LINC02077 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02077 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377172
GTEX Portal (Tissue expression)LINC02077
Human Protein AtlasENSG00000244461-LINC02077 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02077
DMDM Disease mutations105377172
Blocks (Seattle)LINC02077
Human Protein Atlas [tissue]ENSG00000244461-LINC02077 [tissue]
Protein Interaction databases
FunCoupENSG00000244461
BioGRIDLINC02077
STRING (EMBL)LINC02077
ZODIACLINC02077
Ontologies - Pathways
Huge Navigator LINC02077 [HugePedia]
snp3D : Map Gene to Disease105377172
BioCentury BCIQLINC02077
ClinGenLINC02077
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377172
Clinical trialLINC02077
Miscellaneous
canSAR (ICR)LINC02077 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02077
EVEXLINC02077
GoPubMedLINC02077
iHOPLINC02077
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:51 CEST 2018

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