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LINC02080 (long intergenic non-protein coding RNA 2080)

Identity

Alias_symbol (synonym)FLJ30938
Other alias-
HGNC (Hugo) LINC02080
LocusID (NCBI) 101928514
Atlas_Id 79175
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 76799044 and ends at 76807102 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02080   52928
Cards
Entrez_Gene (NCBI)LINC02080  101928514  long intergenic non-protein coding RNA 2080
Aliases
GeneCards (Weizmann)LINC02080
Ensembl hg19 (Hinxton)ENSG00000267065 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267065 [Gene_View]  chr17:76799044-76807102 [Contig_View]  LINC02080 [Vega]
ICGC DataPortalENSG00000267065
TCGA cBioPortalLINC02080
AceView (NCBI)LINC02080
Genatlas (Paris)LINC02080
WikiGenes101928514
SOURCE (Princeton)LINC02080
Genetics Home Reference (NIH)LINC02080
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02080  -     chr17:76799044-76807102 +  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02080  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02080 - 17q25.1 [CytoView hg19]  LINC02080 - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBILINC02080 [Mapview hg19]  LINC02080 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055500
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02080
Cluster EST : UnigeneHs.617206 [ NCBI ]
CGAP (NCI)Hs.617206
Alternative Splicing GalleryENSG00000267065
Gene ExpressionLINC02080 [ NCBI-GEO ]   LINC02080 [ EBI - ARRAY_EXPRESS ]   LINC02080 [ SEEK ]   LINC02080 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02080 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928514
GTEX Portal (Tissue expression)LINC02080
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02080
DMDM Disease mutations101928514
Blocks (Seattle)LINC02080
Human Protein AtlasENSG00000267065
Protein Interaction databases
FunCoupENSG00000267065
BioGRIDLINC02080
STRING (EMBL)LINC02080
ZODIACLINC02080
Ontologies - Pathways
Huge Navigator LINC02080 [HugePedia]
snp3D : Map Gene to Disease101928514
BioCentury BCIQLINC02080
ClinGenLINC02080
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928514
Clinical trialLINC02080
Miscellaneous
canSAR (ICR)LINC02080 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02080
EVEXLINC02080
GoPubMedLINC02080
iHOPLINC02080
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:15:49 CEST 2017

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