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LINC02082 (long intergenic non-protein coding RNA 2082)

Identity

Other alias-
HGNC (Hugo) LINC02082
LocusID (NCBI) 100507661
Atlas_Id 80156
Location 3q26.2  [Link to chromosome band 3q26]
Location_base_pair Starts at 168901945 and ends at 168921993 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02082   52931
Cards
Entrez_Gene (NCBI)LINC02082  100507661  long intergenic non-protein coding RNA 2082
Aliases
GeneCards (Weizmann)LINC02082
Ensembl hg19 (Hinxton)ENSG00000242268 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242268 [Gene_View]  ENSG00000242268 [Sequence]  chr3:168901945-168921993 [Contig_View]  LINC02082 [Vega]
ICGC DataPortalENSG00000242268
TCGA cBioPortalLINC02082
AceView (NCBI)LINC02082
Genatlas (Paris)LINC02082
WikiGenes100507661
SOURCE (Princeton)LINC02082
Genetics Home Reference (NIH)LINC02082
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02082  -     chr3:168901945-168921993 +  3q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02082  -     3q26.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02082 - 3q26.2 [CytoView hg19]  LINC02082 - 3q26.2 [CytoView hg38]
Mapping of homologs : NCBILINC02082 [Mapview hg19]  LINC02082 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX118401
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02082
Cluster EST : UnigeneHs.65918 [ NCBI ]
CGAP (NCI)Hs.65918
Alternative Splicing GalleryENSG00000242268
Gene ExpressionLINC02082 [ NCBI-GEO ]   LINC02082 [ EBI - ARRAY_EXPRESS ]   LINC02082 [ SEEK ]   LINC02082 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02082 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507661
GTEX Portal (Tissue expression)LINC02082
Human Protein AtlasENSG00000242268-LINC02082 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02082
DMDM Disease mutations100507661
Blocks (Seattle)LINC02082
Human Protein Atlas [tissue]ENSG00000242268-LINC02082 [tissue]
Protein Interaction databases
FunCoupENSG00000242268
BioGRIDLINC02082
STRING (EMBL)LINC02082
ZODIACLINC02082
Ontologies - Pathways
Huge Navigator LINC02082 [HugePedia]
snp3D : Map Gene to Disease100507661
BioCentury BCIQLINC02082
ClinGenLINC02082
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507661
Clinical trialLINC02082
Miscellaneous
canSAR (ICR)LINC02082 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02082
EVEXLINC02082
GoPubMedLINC02082
iHOPLINC02082
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:52 CEST 2018

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