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LINC02087 (long intergenic non-protein coding RNA 2087)

Identity

Other alias-
HGNC (Hugo) LINC02087
LocusID (NCBI) 101928567
Atlas_Id 79239
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15806242 and ends at 15817742 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02087   52938
Cards
Entrez_Gene (NCBI)LINC02087  101928567  long intergenic non-protein coding RNA 2087
Aliases
GeneCards (Weizmann)LINC02087
Ensembl hg19 (Hinxton)ENSG00000237057 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237057 [Gene_View]  chr17:15806242-15817742 [Contig_View]  LINC02087 [Vega]
ICGC DataPortalENSG00000237057
TCGA cBioPortalLINC02087
AceView (NCBI)LINC02087
Genatlas (Paris)LINC02087
WikiGenes101928567
SOURCE (Princeton)LINC02087
Genetics Home Reference (NIH)LINC02087
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02087  -     chr17:15806242-15817742 -  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02087  -     17p12   [Description]    (hg19-Feb_2009)
EnsemblLINC02087 - 17p12 [CytoView hg19]  LINC02087 - 17p12 [CytoView hg38]
Mapping of homologs : NCBILINC02087 [Mapview hg19]  LINC02087 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB449379
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02087
Cluster EST : UnigeneHs.569757 [ NCBI ]
CGAP (NCI)Hs.569757
Alternative Splicing GalleryENSG00000237057
Gene ExpressionLINC02087 [ NCBI-GEO ]   LINC02087 [ EBI - ARRAY_EXPRESS ]   LINC02087 [ SEEK ]   LINC02087 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02087 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928567
GTEX Portal (Tissue expression)LINC02087
Human Protein AtlasENSG00000237057-LINC02087 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02087
DMDM Disease mutations101928567
Blocks (Seattle)LINC02087
Human Protein Atlas [tissue]ENSG00000237057-LINC02087 [tissue]
Protein Interaction databases
FunCoupENSG00000237057
BioGRIDLINC02087
STRING (EMBL)LINC02087
ZODIACLINC02087
Ontologies - Pathways
Huge Navigator LINC02087 [HugePedia]
snp3D : Map Gene to Disease101928567
BioCentury BCIQLINC02087
ClinGenLINC02087
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928567
Clinical trialLINC02087
Miscellaneous
canSAR (ICR)LINC02087 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02087
EVEXLINC02087
GoPubMedLINC02087
iHOPLINC02087
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:35:53 CET 2017

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