Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02092 (long intergenic non-protein coding RNA 2092)

Identity

Other alias-
HGNC (Hugo) LINC02092
LocusID (NCBI) 400620
Atlas_Id 80075
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 73786822 and ends at 73800795 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02092   52943
Cards
Entrez_Gene (NCBI)LINC02092  400620  long intergenic non-protein coding RNA 2092
Aliases
GeneCards (Weizmann)LINC02092
Ensembl hg19 (Hinxton)ENSG00000234721 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234721 [Gene_View]  chr17:73786822-73800795 [Contig_View]  LINC02092 [Vega]
ICGC DataPortalENSG00000234721
TCGA cBioPortalLINC02092
AceView (NCBI)LINC02092
Genatlas (Paris)LINC02092
WikiGenes400620
SOURCE (Princeton)LINC02092
Genetics Home Reference (NIH)LINC02092
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02092  -     chr17:73786822-73800795 +  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02092  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02092 - 17q25.1 [CytoView hg19]  LINC02092 - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBILINC02092 [Mapview hg19]  LINC02092 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035399
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02092
Cluster EST : UnigeneHs.348644 [ NCBI ]
CGAP (NCI)Hs.348644
Alternative Splicing GalleryENSG00000234721
Gene ExpressionLINC02092 [ NCBI-GEO ]   LINC02092 [ EBI - ARRAY_EXPRESS ]   LINC02092 [ SEEK ]   LINC02092 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02092 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400620
GTEX Portal (Tissue expression)LINC02092
Human Protein AtlasENSG00000234721-LINC02092 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02092
DMDM Disease mutations400620
Blocks (Seattle)LINC02092
Human Protein Atlas [tissue]ENSG00000234721-LINC02092 [tissue]
Protein Interaction databases
FunCoupENSG00000234721
BioGRIDLINC02092
STRING (EMBL)LINC02092
ZODIACLINC02092
Ontologies - Pathways
Huge Navigator LINC02092 [HugePedia]
snp3D : Map Gene to Disease400620
BioCentury BCIQLINC02092
ClinGenLINC02092
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400620
Clinical trialLINC02092
Miscellaneous
canSAR (ICR)LINC02092 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02092
EVEXLINC02092
GoPubMedLINC02092
iHOPLINC02092
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:35:54 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.