Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02098 (long intergenic non-protein coding RNA 2098)

Identity

Alias_symbol (synonym)RP11-702B10.1
Other alias-
HGNC (Hugo) LINC02098
LocusID (NCBI) 105369564
Atlas_Id 79675
Location 11q24.3  [Link to chromosome band 11q24]
Location_base_pair Starts at 128208766 and ends at 128241441 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LINC02098   52950
Cards
Entrez_Gene (NCBI)LINC02098  105369564  long intergenic non-protein coding RNA 2098
Aliases
GeneCards (Weizmann)LINC02098
Ensembl hg19 (Hinxton)ENSG00000272575 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272575 [Gene_View]  ENSG00000272575 [Sequence]  chr11:128208766-128241441 [Contig_View]  LINC02098 [Vega]
ICGC DataPortalENSG00000272575
TCGA cBioPortalLINC02098
AceView (NCBI)LINC02098
Genatlas (Paris)LINC02098
WikiGenes105369564
SOURCE (Princeton)LINC02098
Genetics Home Reference (NIH)LINC02098
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02098  -     chr11:128208766-128241441 +  11q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02098  -     11q24.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02098 - 11q24.3 [CytoView hg19]  LINC02098 - 11q24.3 [CytoView hg38]
ImmunoBaseENSG00000272575
Mapping of homologs : NCBILINC02098 [Mapview hg19]  LINC02098 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA446199 AA446200 BU561672
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02098
Cluster EST : UnigeneHs.591937 [ NCBI ]
CGAP (NCI)Hs.591937
Alternative Splicing GalleryENSG00000272575
Gene ExpressionLINC02098 [ NCBI-GEO ]   LINC02098 [ EBI - ARRAY_EXPRESS ]   LINC02098 [ SEEK ]   LINC02098 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02098 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369564
GTEX Portal (Tissue expression)LINC02098
Human Protein AtlasENSG00000272575-LINC02098 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02098
DMDM Disease mutations105369564
Blocks (Seattle)LINC02098
Human Protein Atlas [tissue]ENSG00000272575-LINC02098 [tissue]
Protein Interaction databases
FunCoupENSG00000272575
BioGRIDLINC02098
STRING (EMBL)LINC02098
ZODIACLINC02098
Ontologies - Pathways
Huge Navigator LINC02098 [HugePedia]
snp3D : Map Gene to Disease105369564
BioCentury BCIQLINC02098
ClinGenLINC02098
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369564
Clinical trialLINC02098
Miscellaneous
canSAR (ICR)LINC02098 (select the gene name)
DataMed IndexLINC02098
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02098
EVEXLINC02098
GoPubMedLINC02098
iHOPLINC02098
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jun 7 17:25:29 CEST 2019
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