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LINC02101 (long intergenic non-protein coding RNA 2101)

Identity

Other alias-
HGNC (Hugo) LINC02101
LocusID (NCBI) 101928569
Atlas_Id 79406
Location 5q11.2  [Link to chromosome band 5q11]
Location_base_pair Starts at 58107632 and ends at 58122341 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02101   52956
Cards
Entrez_Gene (NCBI)LINC02101  101928569  long intergenic non-protein coding RNA 2101
Aliases
GeneCards (Weizmann)LINC02101
Ensembl hg19 (Hinxton)ENSG00000248132 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248132 [Gene_View]  ENSG00000248132 [Sequence]  chr5:58107632-58122341 [Contig_View]  LINC02101 [Vega]
ICGC DataPortalENSG00000248132
TCGA cBioPortalLINC02101
AceView (NCBI)LINC02101
Genatlas (Paris)LINC02101
WikiGenes101928569
SOURCE (Princeton)LINC02101
Genetics Home Reference (NIH)LINC02101
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02101  -     chr5:58107632-58122341 -  5q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02101  -     5q11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02101 - 5q11.2 [CytoView hg19]  LINC02101 - 5q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC02101 [Mapview hg19]  LINC02101 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB020668
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02101
Cluster EST : UnigeneHs.319708 [ NCBI ]
CGAP (NCI)Hs.319708
Alternative Splicing GalleryENSG00000248132
Gene ExpressionLINC02101 [ NCBI-GEO ]   LINC02101 [ EBI - ARRAY_EXPRESS ]   LINC02101 [ SEEK ]   LINC02101 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02101 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928569
GTEX Portal (Tissue expression)LINC02101
Human Protein AtlasENSG00000248132-LINC02101 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02101
DMDM Disease mutations101928569
Blocks (Seattle)LINC02101
Human Protein Atlas [tissue]ENSG00000248132-LINC02101 [tissue]
Protein Interaction databases
FunCoupENSG00000248132
BioGRIDLINC02101
STRING (EMBL)LINC02101
ZODIACLINC02101
Ontologies - Pathways
Huge Navigator LINC02101 [HugePedia]
snp3D : Map Gene to Disease101928569
BioCentury BCIQLINC02101
ClinGenLINC02101
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928569
Clinical trialLINC02101
Miscellaneous
canSAR (ICR)LINC02101 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02101
EVEXLINC02101
GoPubMedLINC02101
iHOPLINC02101
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:56:55 CEST 2018

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