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LINC02102 (long intergenic non-protein coding RNA 2102)

Identity

Other alias-
HGNC (Hugo) LINC02102
LocusID (NCBI) 100505625
Atlas_Id 79724
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 6686325 and ends at 6707711 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02102   52957
Cards
Entrez_Gene (NCBI)LINC02102  100505625  long intergenic non-protein coding RNA 2102
Aliases
GeneCards (Weizmann)LINC02102
Ensembl hg19 (Hinxton)ENSG00000248677 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248677 [Gene_View]  ENSG00000248677 [Sequence]  chr5:6686325-6707711 [Contig_View]  LINC02102 [Vega]
ICGC DataPortalENSG00000248677
TCGA cBioPortalLINC02102
AceView (NCBI)LINC02102
Genatlas (Paris)LINC02102
WikiGenes100505625
SOURCE (Princeton)LINC02102
Genetics Home Reference (NIH)LINC02102
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02102  -     chr5:6686325-6707711 -  5p15.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02102  -     5p15.31   [Description]    (hg19-Feb_2009)
EnsemblLINC02102 - 5p15.31 [CytoView hg19]  LINC02102 - 5p15.31 [CytoView hg38]
Mapping of homologs : NCBILINC02102 [Mapview hg19]  LINC02102 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126802
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02102
Cluster EST : UnigeneHs.550028 [ NCBI ]
CGAP (NCI)Hs.550028
Alternative Splicing GalleryENSG00000248677
Gene ExpressionLINC02102 [ NCBI-GEO ]   LINC02102 [ EBI - ARRAY_EXPRESS ]   LINC02102 [ SEEK ]   LINC02102 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02102 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505625
GTEX Portal (Tissue expression)LINC02102
Human Protein AtlasENSG00000248677-LINC02102 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02102
DMDM Disease mutations100505625
Blocks (Seattle)LINC02102
Human Protein Atlas [tissue]ENSG00000248677-LINC02102 [tissue]
Protein Interaction databases
FunCoupENSG00000248677
BioGRIDLINC02102
STRING (EMBL)LINC02102
ZODIACLINC02102
Ontologies - Pathways
Huge Navigator LINC02102 [HugePedia]
snp3D : Map Gene to Disease100505625
BioCentury BCIQLINC02102
ClinGenLINC02102
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505625
Clinical trialLINC02102
Miscellaneous
canSAR (ICR)LINC02102 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02102
EVEXLINC02102
GoPubMedLINC02102
iHOPLINC02102
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:55 CEST 2018

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