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LINC02104 (long intergenic non-protein coding RNA 2104)

Identity

Other alias-
HGNC (Hugo) LINC02104
LocusID (NCBI) 101926940
Atlas_Id 79129
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 39520431 and ends at 39524708 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02104   52959
Cards
Entrez_Gene (NCBI)LINC02104  101926940  long intergenic non-protein coding RNA 2104
Aliases
GeneCards (Weizmann)LINC02104
Ensembl hg19 (Hinxton)ENSG00000271334 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000271334 [Gene_View]  ENSG00000271334 [Sequence]  chr5:39520431-39524708 [Contig_View]  LINC02104 [Vega]
ICGC DataPortalENSG00000271334
TCGA cBioPortalLINC02104
AceView (NCBI)LINC02104
Genatlas (Paris)LINC02104
WikiGenes101926940
SOURCE (Princeton)LINC02104
Genetics Home Reference (NIH)LINC02104
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02104  -     chr5:39520431-39524708 +  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02104  -     5p13.1   [Description]    (hg19-Feb_2009)
LINC02104 - 5p13.1 [CytoView hg19]  LINC02104 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02104 [Mapview hg19]  LINC02104 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF508204 BG207267 BX117422
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02104
Cluster EST : UnigeneHs.738168 [ NCBI ]
CGAP (NCI)Hs.738168
Alternative Splicing GalleryENSG00000271334
Gene ExpressionLINC02104 [ NCBI-GEO ]   LINC02104 [ EBI - ARRAY_EXPRESS ]   LINC02104 [ SEEK ]   LINC02104 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02104 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926940
GTEX Portal (Tissue expression)LINC02104
Human Protein AtlasENSG00000271334-LINC02104 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02104
DMDM Disease mutations101926940
Blocks (Seattle)LINC02104
Human Protein Atlas [tissue]ENSG00000271334-LINC02104 [tissue]
Protein Interaction databases
FunCoupENSG00000271334
BioGRIDLINC02104
STRING (EMBL)LINC02104
ZODIACLINC02104
Ontologies - Pathways
Huge Navigator LINC02104 [HugePedia]
snp3D : Map Gene to Disease101926940
BioCentury BCIQLINC02104
ClinGenLINC02104
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926940
Clinical trialLINC02104
Miscellaneous
canSAR (ICR)LINC02104 (select the gene name)
DataMed IndexLINC02104
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02104
EVEXLINC02104
GoPubMedLINC02104
iHOPLINC02104
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:48 CEST 2019

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