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LINC02106 (long intergenic non-protein coding RNA 2106)

Identity

Other alias-
HGNC (Hugo) LINC02106
LocusID (NCBI) 100287592
Atlas_Id 79265
Location 5q11.1  [Link to chromosome band 5q11]
Location_base_pair Starts at 50969217 and ends at 50970187 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02106   52961
Cards
Entrez_Gene (NCBI)LINC02106  100287592  long intergenic non-protein coding RNA 2106
Aliases
GeneCards (Weizmann)LINC02106
Ensembl hg19 (Hinxton)ENSG00000251573 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251573 [Gene_View]  ENSG00000251573 [Sequence]  chr5:50969217-50970187 [Contig_View]  LINC02106 [Vega]
ICGC DataPortalENSG00000251573
TCGA cBioPortalLINC02106
AceView (NCBI)LINC02106
Genatlas (Paris)LINC02106
WikiGenes100287592
SOURCE (Princeton)LINC02106
Genetics Home Reference (NIH)LINC02106
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02106  -     chr5:50969217-50970187 -  5q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02106  -     5q11.1   [Description]    (hg19-Feb_2009)
LINC02106 - 5q11.1 [CytoView hg19]  LINC02106 - 5q11.1 [CytoView hg38]
Mapping of homologs : NCBILINC02106 [Mapview hg19]  LINC02106 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM726851
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02106
Cluster EST : UnigeneHs.519298 [ NCBI ]
CGAP (NCI)Hs.519298
Alternative Splicing GalleryENSG00000251573
Gene ExpressionLINC02106 [ NCBI-GEO ]   LINC02106 [ EBI - ARRAY_EXPRESS ]   LINC02106 [ SEEK ]   LINC02106 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02106 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287592
GTEX Portal (Tissue expression)LINC02106
Human Protein AtlasENSG00000251573-LINC02106 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02106
DMDM Disease mutations100287592
Blocks (Seattle)LINC02106
Human Protein Atlas [tissue]ENSG00000251573-LINC02106 [tissue]
Protein Interaction databases
FunCoupENSG00000251573
BioGRIDLINC02106
STRING (EMBL)LINC02106
ZODIACLINC02106
Ontologies - Pathways
Huge Navigator LINC02106 [HugePedia]
snp3D : Map Gene to Disease100287592
BioCentury BCIQLINC02106
ClinGenLINC02106
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287592
Clinical trialLINC02106
Miscellaneous
canSAR (ICR)LINC02106 (select the gene name)
DataMed IndexLINC02106
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02106
EVEXLINC02106
GoPubMedLINC02106
iHOPLINC02106
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:48 CEST 2019

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