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LINC02110 (long intergenic non-protein coding RNA 2110)

Identity

Other alias-
HGNC (Hugo) LINC02110
LocusID (NCBI) 105374729
Atlas_Id 78874
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 37948491 and ends at 37951054 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02110   52965
Cards
Entrez_Gene (NCBI)LINC02110  105374729  long intergenic non-protein coding RNA 2110
Aliases
GeneCards (Weizmann)LINC02110
Ensembl hg19 (Hinxton)ENSG00000251518 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251518 [Gene_View]  ENSG00000251518 [Sequence]  chr5:37948491-37951054 [Contig_View]  LINC02110 [Vega]
ICGC DataPortalENSG00000251518
TCGA cBioPortalLINC02110
AceView (NCBI)LINC02110
Genatlas (Paris)LINC02110
WikiGenes105374729
SOURCE (Princeton)LINC02110
Genetics Home Reference (NIH)LINC02110
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02110  -     chr5:37948491-37951054 +  5p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02110  -     5p13.2   [Description]    (hg19-Feb_2009)
LINC02110 - 5p13.2 [CytoView hg19]  LINC02110 - 5p13.2 [CytoView hg38]
Mapping of homologs : NCBILINC02110 [Mapview hg19]  LINC02110 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX104209 DB317721
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02110
Cluster EST : UnigeneHs.738100 [ NCBI ]
CGAP (NCI)Hs.738100
Alternative Splicing GalleryENSG00000251518
Gene ExpressionLINC02110 [ NCBI-GEO ]   LINC02110 [ EBI - ARRAY_EXPRESS ]   LINC02110 [ SEEK ]   LINC02110 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02110 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374729
GTEX Portal (Tissue expression)LINC02110
Human Protein AtlasENSG00000251518-LINC02110 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02110
DMDM Disease mutations105374729
Blocks (Seattle)LINC02110
Human Protein Atlas [tissue]ENSG00000251518-LINC02110 [tissue]
Protein Interaction databases
FunCoupENSG00000251518
BioGRIDLINC02110
STRING (EMBL)LINC02110
ZODIACLINC02110
Ontologies - Pathways
Huge Navigator LINC02110 [HugePedia]
snp3D : Map Gene to Disease105374729
BioCentury BCIQLINC02110
ClinGenLINC02110
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374729
Clinical trialLINC02110
Miscellaneous
canSAR (ICR)LINC02110 (select the gene name)
DataMed IndexLINC02110
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02110
EVEXLINC02110
GoPubMedLINC02110
iHOPLINC02110
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:49 CEST 2019

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