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LINC02112 (long intergenic non-protein coding RNA 2112)

Identity

Other alias-
HGNC (Hugo) LINC02112
LocusID (NCBI) 285692
Atlas_Id 79320
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 9641315 and ends at 9903824 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02112   27756
Cards
Entrez_Gene (NCBI)LINC02112  285692  long intergenic non-protein coding RNA 2112
Aliases
GeneCards (Weizmann)LINC02112
Ensembl hg19 (Hinxton)ENSG00000249781 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249781 [Gene_View]  ENSG00000249781 [Sequence]  chr5:9641315-9903824 [Contig_View]  LINC02112 [Vega]
ICGC DataPortalENSG00000249781
TCGA cBioPortalLINC02112
AceView (NCBI)LINC02112
Genatlas (Paris)LINC02112
WikiGenes285692
SOURCE (Princeton)LINC02112
Genetics Home Reference (NIH)LINC02112
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02112  -     chr5:9641315-9903824 -  5p15.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02112  -     5p15.31   [Description]    (hg19-Feb_2009)
LINC02112 - 5p15.31 [CytoView hg19]  LINC02112 - 5p15.31 [CytoView hg38]
Mapping of homologs : NCBILINC02112 [Mapview hg19]  LINC02112 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF009306 BC031253 BC047112
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02112
Cluster EST : UnigeneHs.651487 [ NCBI ]
CGAP (NCI)Hs.651487
Alternative Splicing GalleryENSG00000249781
Gene ExpressionLINC02112 [ NCBI-GEO ]   LINC02112 [ EBI - ARRAY_EXPRESS ]   LINC02112 [ SEEK ]   LINC02112 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02112 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285692
GTEX Portal (Tissue expression)LINC02112
Human Protein AtlasENSG00000249781-LINC02112 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02112
DMDM Disease mutations285692
Blocks (Seattle)LINC02112
Human Protein Atlas [tissue]ENSG00000249781-LINC02112 [tissue]
Protein Interaction databases
FunCoupENSG00000249781
BioGRIDLINC02112
STRING (EMBL)LINC02112
ZODIACLINC02112
Ontologies - Pathways
Huge Navigator LINC02112 [HugePedia]
snp3D : Map Gene to Disease285692
BioCentury BCIQLINC02112
ClinGenLINC02112
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285692
Clinical trialLINC02112
Miscellaneous
canSAR (ICR)LINC02112 (select the gene name)
DataMed IndexLINC02112
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02112
EVEXLINC02112
GoPubMedLINC02112
iHOPLINC02112
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:49 CEST 2019

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