Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC02114 (long intergenic non-protein coding RNA 2114)

Identity

Other alias-
HGNC (Hugo) LINC02114
LocusID (NCBI) 101929153
Atlas_Id 80166
Location 5p15.32  [Link to chromosome band 5p15]
Location_base_pair Starts at 4773481 and ends at 4774865 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02114   52968
Cards
Entrez_Gene (NCBI)LINC02114  101929153  long intergenic non-protein coding RNA 2114
Aliases
GeneCards (Weizmann)LINC02114
Ensembl hg19 (Hinxton)ENSG00000249521 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249521 [Gene_View]  ENSG00000249521 [Sequence]  chr5:4773481-4774865 [Contig_View]  LINC02114 [Vega]
ICGC DataPortalENSG00000249521
TCGA cBioPortalLINC02114
AceView (NCBI)LINC02114
Genatlas (Paris)LINC02114
WikiGenes101929153
SOURCE (Princeton)LINC02114
Genetics Home Reference (NIH)LINC02114
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02114  -     chr5:4773481-4774865 +  5p15.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02114  -     5p15.32   [Description]    (hg19-Feb_2009)
LINC02114 - 5p15.32 [CytoView hg19]  LINC02114 - 5p15.32 [CytoView hg38]
Mapping of homologs : NCBILINC02114 [Mapview hg19]  LINC02114 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC034630 BU852927
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02114
Cluster EST : UnigeneHs.385526 [ NCBI ]
CGAP (NCI)Hs.385526
Alternative Splicing GalleryENSG00000249521
Gene ExpressionLINC02114 [ NCBI-GEO ]   LINC02114 [ EBI - ARRAY_EXPRESS ]   LINC02114 [ SEEK ]   LINC02114 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02114 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929153
GTEX Portal (Tissue expression)LINC02114
Human Protein AtlasENSG00000249521-LINC02114 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02114
DMDM Disease mutations101929153
Blocks (Seattle)LINC02114
Human Protein Atlas [tissue]ENSG00000249521-LINC02114 [tissue]
Protein Interaction databases
FunCoupENSG00000249521
BioGRIDLINC02114
STRING (EMBL)LINC02114
ZODIACLINC02114
Ontologies - Pathways
Huge Navigator LINC02114 [HugePedia]
snp3D : Map Gene to Disease101929153
BioCentury BCIQLINC02114
ClinGenLINC02114
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929153
Clinical trialLINC02114
Miscellaneous
canSAR (ICR)LINC02114 (select the gene name)
DataMed IndexLINC02114
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02114
EVEXLINC02114
GoPubMedLINC02114
iHOPLINC02114
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Apr 30 13:35:49 CEST 2019

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