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LINC02119 (long intergenic non-protein coding RNA 2119)

Identity

Other alias-
HGNC (Hugo) LINC02119
LocusID (NCBI) 101929745
Atlas_Id 80004
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 38148480 and ends at 38153715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02119   52975
Cards
Entrez_Gene (NCBI)LINC02119  101929745  long intergenic non-protein coding RNA 2119
Aliases
GeneCards (Weizmann)LINC02119
Ensembl hg19 (Hinxton)ENSG00000248461 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248461 [Gene_View]  ENSG00000248461 [Sequence]  chr5:38148480-38153715 [Contig_View]  LINC02119 [Vega]
ICGC DataPortalENSG00000248461
TCGA cBioPortalLINC02119
AceView (NCBI)LINC02119
Genatlas (Paris)LINC02119
WikiGenes101929745
SOURCE (Princeton)LINC02119
Genetics Home Reference (NIH)LINC02119
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02119  -     chr5:38148480-38153715 +  5p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02119  -     5p13.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02119 - 5p13.2 [CytoView hg19]  LINC02119 - 5p13.2 [CytoView hg38]
Mapping of homologs : NCBILINC02119 [Mapview hg19]  LINC02119 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028978
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02119
Cluster EST : UnigeneHs.374715 [ NCBI ]
CGAP (NCI)Hs.374715
Alternative Splicing GalleryENSG00000248461
Gene ExpressionLINC02119 [ NCBI-GEO ]   LINC02119 [ EBI - ARRAY_EXPRESS ]   LINC02119 [ SEEK ]   LINC02119 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02119 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929745
GTEX Portal (Tissue expression)LINC02119
Human Protein AtlasENSG00000248461-LINC02119 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02119
DMDM Disease mutations101929745
Blocks (Seattle)LINC02119
Human Protein Atlas [tissue]ENSG00000248461-LINC02119 [tissue]
Protein Interaction databases
FunCoupENSG00000248461
BioGRIDLINC02119
STRING (EMBL)LINC02119
ZODIACLINC02119
Ontologies - Pathways
Huge Navigator LINC02119 [HugePedia]
snp3D : Map Gene to Disease101929745
BioCentury BCIQLINC02119
ClinGenLINC02119
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929745
Clinical trialLINC02119
Miscellaneous
canSAR (ICR)LINC02119 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02119
EVEXLINC02119
GoPubMedLINC02119
iHOPLINC02119
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:58 CEST 2018

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