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LINC02121 (long intergenic non-protein coding RNA 2121)

Identity

Other alias-
HGNC (Hugo) LINC02121
LocusID (NCBI) 105374631
Atlas_Id 79969
Location 5p15.32  [Link to chromosome band 5p15]
Location_base_pair Starts at 5069192 and ends at 5078311 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02121   52977
Cards
Entrez_Gene (NCBI)LINC02121  105374631  long intergenic non-protein coding RNA 2121
Aliases
GeneCards (Weizmann)LINC02121
Ensembl hg19 (Hinxton)ENSG00000250529 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250529 [Gene_View]  ENSG00000250529 [Sequence]  chr5:5069192-5078311 [Contig_View]  LINC02121 [Vega]
ICGC DataPortalENSG00000250529
TCGA cBioPortalLINC02121
AceView (NCBI)LINC02121
Genatlas (Paris)LINC02121
WikiGenes105374631
SOURCE (Princeton)LINC02121
Genetics Home Reference (NIH)LINC02121
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02121  -     chr5:5069192-5078311 -  5p15.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02121  -     5p15.32   [Description]    (hg19-Feb_2009)
EnsemblLINC02121 - 5p15.32 [CytoView hg19]  LINC02121 - 5p15.32 [CytoView hg38]
Mapping of homologs : NCBILINC02121 [Mapview hg19]  LINC02121 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX089348
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02121
Cluster EST : UnigeneHs.570964 [ NCBI ]
CGAP (NCI)Hs.570964
Alternative Splicing GalleryENSG00000250529
Gene ExpressionLINC02121 [ NCBI-GEO ]   LINC02121 [ EBI - ARRAY_EXPRESS ]   LINC02121 [ SEEK ]   LINC02121 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02121 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374631
GTEX Portal (Tissue expression)LINC02121
Human Protein AtlasENSG00000250529-LINC02121 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02121
DMDM Disease mutations105374631
Blocks (Seattle)LINC02121
Human Protein Atlas [tissue]ENSG00000250529-LINC02121 [tissue]
Protein Interaction databases
FunCoupENSG00000250529
BioGRIDLINC02121
STRING (EMBL)LINC02121
ZODIACLINC02121
Ontologies - Pathways
Huge Navigator LINC02121 [HugePedia]
snp3D : Map Gene to Disease105374631
BioCentury BCIQLINC02121
ClinGenLINC02121
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374631
Clinical trialLINC02121
Miscellaneous
canSAR (ICR)LINC02121 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02121
EVEXLINC02121
GoPubMedLINC02121
iHOPLINC02121
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:59 CEST 2018

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