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LINC02123 (long intergenic non-protein coding RNA 2123)

Identity

Other alias-
HGNC (Hugo) LINC02123
LocusID (NCBI) 101929261
Atlas_Id 79453
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 7346986 and ends at 7347977 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02123   52980
Cards
Entrez_Gene (NCBI)LINC02123  101929261  long intergenic non-protein coding RNA 2123
Aliases
GeneCards (Weizmann)LINC02123
Ensembl hg19 (Hinxton)ENSG00000250668 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250668 [Gene_View]  ENSG00000250668 [Sequence]  chr5:7346986-7347977 [Contig_View]  LINC02123 [Vega]
ICGC DataPortalENSG00000250668
TCGA cBioPortalLINC02123
AceView (NCBI)LINC02123
Genatlas (Paris)LINC02123
WikiGenes101929261
SOURCE (Princeton)LINC02123
Genetics Home Reference (NIH)LINC02123
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02123  -     chr5:7346986-7347977 -  5p15.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02123  -     5p15.31   [Description]    (hg19-Feb_2009)
EnsemblLINC02123 - 5p15.31 [CytoView hg19]  LINC02123 - 5p15.31 [CytoView hg38]
Mapping of homologs : NCBILINC02123 [Mapview hg19]  LINC02123 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030121
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02123
Cluster EST : UnigeneHs.308202 [ NCBI ]
CGAP (NCI)Hs.308202
Alternative Splicing GalleryENSG00000250668
Gene ExpressionLINC02123 [ NCBI-GEO ]   LINC02123 [ EBI - ARRAY_EXPRESS ]   LINC02123 [ SEEK ]   LINC02123 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02123 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929261
GTEX Portal (Tissue expression)LINC02123
Human Protein AtlasENSG00000250668-LINC02123 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02123
DMDM Disease mutations101929261
Blocks (Seattle)LINC02123
Human Protein Atlas [tissue]ENSG00000250668-LINC02123 [tissue]
Protein Interaction databases
FunCoupENSG00000250668
BioGRIDLINC02123
STRING (EMBL)LINC02123
ZODIACLINC02123
Ontologies - Pathways
Huge Navigator LINC02123 [HugePedia]
snp3D : Map Gene to Disease101929261
BioCentury BCIQLINC02123
ClinGenLINC02123
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929261
Clinical trialLINC02123
Miscellaneous
canSAR (ICR)LINC02123 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02123
EVEXLINC02123
GoPubMedLINC02123
iHOPLINC02123
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:59 CEST 2018

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