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LINC02124 (long intergenic non-protein coding RNA 2124)

Identity

Other alias-
HGNC (Hugo) LINC02124
LocusID (NCBI) 105371048
Atlas_Id 79070
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 1889114 and ends at 1890433 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02124   52981
Cards
Entrez_Gene (NCBI)LINC02124  105371048  long intergenic non-protein coding RNA 2124
Aliases
GeneCards (Weizmann)LINC02124
Ensembl hg19 (Hinxton)ENSG00000259947 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259947 [Gene_View]  chr16:1889114-1890433 [Contig_View]  LINC02124 [Vega]
ICGC DataPortalENSG00000259947
TCGA cBioPortalLINC02124
AceView (NCBI)LINC02124
Genatlas (Paris)LINC02124
WikiGenes105371048
SOURCE (Princeton)LINC02124
Genetics Home Reference (NIH)LINC02124
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02124  -     chr16:1889114-1890433 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02124  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02124 - 16p13.3 [CytoView hg19]  LINC02124 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBILINC02124 [Mapview hg19]  LINC02124 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187609
Consensus coding sequences : CCDS (NCBI)LINC02124
Alternative Splicing GalleryENSG00000259947
Gene ExpressionLINC02124 [ NCBI-GEO ]   LINC02124 [ EBI - ARRAY_EXPRESS ]   LINC02124 [ SEEK ]   LINC02124 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02124 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371048
GTEX Portal (Tissue expression)LINC02124
Human Protein AtlasENSG00000259947-LINC02124 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02124
DMDM Disease mutations105371048
Blocks (Seattle)LINC02124
Human Protein Atlas [tissue]ENSG00000259947-LINC02124 [tissue]
Protein Interaction databases
FunCoupENSG00000259947
BioGRIDLINC02124
STRING (EMBL)LINC02124
ZODIACLINC02124
Ontologies - Pathways
Huge Navigator LINC02124 [HugePedia]
snp3D : Map Gene to Disease105371048
BioCentury BCIQLINC02124
ClinGenLINC02124
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371048
Clinical trialLINC02124
Miscellaneous
canSAR (ICR)LINC02124 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02124
EVEXLINC02124
GoPubMedLINC02124
iHOPLINC02124
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:33:30 CET 2017

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