Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02125 (long intergenic non-protein coding RNA 2125)

Identity

Other alias-
HGNC (Hugo) LINC02125
LocusID (NCBI) 101928203
Atlas_Id 79001
Location 16q23.1  [Link to chromosome band 16q23]
Location_base_pair Starts at 76634998 and ends at 76658478 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02125   52982
Cards
Entrez_Gene (NCBI)LINC02125  101928203  long intergenic non-protein coding RNA 2125
Aliases
GeneCards (Weizmann)LINC02125
Ensembl hg19 (Hinxton)ENSG00000250514 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250514 [Gene_View]  chr16:76634998-76658478 [Contig_View]  LINC02125 [Vega]
ICGC DataPortalENSG00000250514
TCGA cBioPortalLINC02125
AceView (NCBI)LINC02125
Genatlas (Paris)LINC02125
WikiGenes101928203
SOURCE (Princeton)LINC02125
Genetics Home Reference (NIH)LINC02125
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02125  -     chr16:76634998-76658478 +  16q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02125  -     16q23.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02125 - 16q23.1 [CytoView hg19]  LINC02125 - 16q23.1 [CytoView hg38]
Mapping of homologs : NCBILINC02125 [Mapview hg19]  LINC02125 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057218
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02125
Cluster EST : UnigeneHs.737035 [ NCBI ]
CGAP (NCI)Hs.737035
Alternative Splicing GalleryENSG00000250514
Gene ExpressionLINC02125 [ NCBI-GEO ]   LINC02125 [ EBI - ARRAY_EXPRESS ]   LINC02125 [ SEEK ]   LINC02125 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02125 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928203
GTEX Portal (Tissue expression)LINC02125
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02125
DMDM Disease mutations101928203
Blocks (Seattle)LINC02125
Human Protein AtlasENSG00000250514
Protein Interaction databases
FunCoupENSG00000250514
BioGRIDLINC02125
STRING (EMBL)LINC02125
ZODIACLINC02125
Ontologies - Pathways
Huge Navigator LINC02125 [HugePedia]
snp3D : Map Gene to Disease101928203
BioCentury BCIQLINC02125
ClinGenLINC02125
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928203
Clinical trialLINC02125
Miscellaneous
canSAR (ICR)LINC02125 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02125
EVEXLINC02125
GoPubMedLINC02125
iHOPLINC02125
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:55 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.