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LINC02150 (long intergenic non-protein coding RNA 2150)

Identity

Other alias-
HGNC (Hugo) LINC02150
LocusID (NCBI) 101929505
Atlas_Id 80203
Location 5p15.1  [Link to chromosome band 5p15]
Location_base_pair Starts at 16373361 and ends at 16441102 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02150   53012
Cards
Entrez_Gene (NCBI)LINC02150  101929505  long intergenic non-protein coding RNA 2150
Aliases
GeneCards (Weizmann)LINC02150
Ensembl hg19 (Hinxton)ENSG00000248150 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248150 [Gene_View]  ENSG00000248150 [Sequence]  chr5:16373361-16441102 [Contig_View]  LINC02150 [Vega]
ICGC DataPortalENSG00000248150
TCGA cBioPortalLINC02150
AceView (NCBI)LINC02150
Genatlas (Paris)LINC02150
WikiGenes101929505
SOURCE (Princeton)LINC02150
Genetics Home Reference (NIH)LINC02150
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02150  -     chr5:16373361-16441102 -  5p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02150  -     5p15.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02150 - 5p15.1 [CytoView hg19]  LINC02150 - 5p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02150 [Mapview hg19]  LINC02150 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042074
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02150
Cluster EST : UnigeneHs.639360 [ NCBI ]
CGAP (NCI)Hs.639360
Alternative Splicing GalleryENSG00000248150
Gene ExpressionLINC02150 [ NCBI-GEO ]   LINC02150 [ EBI - ARRAY_EXPRESS ]   LINC02150 [ SEEK ]   LINC02150 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02150 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929505
GTEX Portal (Tissue expression)LINC02150
Human Protein AtlasENSG00000248150-LINC02150 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02150
DMDM Disease mutations101929505
Blocks (Seattle)LINC02150
Human Protein Atlas [tissue]ENSG00000248150-LINC02150 [tissue]
Protein Interaction databases
FunCoupENSG00000248150
BioGRIDLINC02150
STRING (EMBL)LINC02150
ZODIACLINC02150
Ontologies - Pathways
Huge Navigator LINC02150 [HugePedia]
snp3D : Map Gene to Disease101929505
BioCentury BCIQLINC02150
ClinGenLINC02150
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929505
Clinical trialLINC02150
Miscellaneous
canSAR (ICR)LINC02150 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02150
EVEXLINC02150
GoPubMedLINC02150
iHOPLINC02150
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:04 CEST 2018

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