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LINC02153 (long intergenic non-protein coding RNA 2153)

Identity

Alias_symbol (synonym)ENST00000517573
Other alias-
HGNC (Hugo) LINC02153
LocusID (NCBI) 286114
Atlas_Id 78972
Location 8p21.3  [Link to chromosome band 8p21]
Location_base_pair Starts at 20973986 and ends at 20995119 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02153   27823
Cards
Entrez_Gene (NCBI)LINC02153  286114  long intergenic non-protein coding RNA 2153
Aliases
GeneCards (Weizmann)LINC02153
Ensembl hg19 (Hinxton)ENSG00000253199 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253199 [Gene_View]  chr8:20973986-20995119 [Contig_View]  LINC02153 [Vega]
ICGC DataPortalENSG00000253199
TCGA cBioPortalLINC02153
AceView (NCBI)LINC02153
Genatlas (Paris)LINC02153
WikiGenes286114
SOURCE (Princeton)LINC02153
Genetics Home Reference (NIH)LINC02153
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02153  -     chr8:20973986-20995119 +  8p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02153  -     8p21.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02153 - 8p21.3 [CytoView hg19]  LINC02153 - 8p21.3 [CytoView hg38]
Mapping of homologs : NCBILINC02153 [Mapview hg19]  LINC02153 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK058067
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02153
Cluster EST : UnigeneHs.651884 [ NCBI ]
CGAP (NCI)Hs.651884
Alternative Splicing GalleryENSG00000253199
Gene ExpressionLINC02153 [ NCBI-GEO ]   LINC02153 [ EBI - ARRAY_EXPRESS ]   LINC02153 [ SEEK ]   LINC02153 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02153 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)286114
GTEX Portal (Tissue expression)LINC02153
Human Protein AtlasENSG00000253199-LINC02153 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02153
DMDM Disease mutations286114
Blocks (Seattle)LINC02153
Human Protein Atlas [tissue]ENSG00000253199-LINC02153 [tissue]
Protein Interaction databases
FunCoupENSG00000253199
BioGRIDLINC02153
STRING (EMBL)LINC02153
ZODIACLINC02153
Ontologies - Pathways
Huge Navigator LINC02153 [HugePedia]
snp3D : Map Gene to Disease286114
BioCentury BCIQLINC02153
ClinGenLINC02153
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286114
Clinical trialLINC02153
Miscellaneous
canSAR (ICR)LINC02153 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02153
EVEXLINC02153
GoPubMedLINC02153
iHOPLINC02153
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:26 CET 2017

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