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LINC02174 (long intergenic non-protein coding RNA 2174)

Identity

Other alias-
HGNC (Hugo) LINC02174
LocusID (NCBI) 105377536
Atlas_Id 79775
Location 4q34.1  [Link to chromosome band 4q34]
Location_base_pair Starts at 171602683 and ends at 171638763 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02174   53037
Cards
Entrez_Gene (NCBI)LINC02174  105377536  long intergenic non-protein coding RNA 2174
Aliases
GeneCards (Weizmann)LINC02174
Ensembl hg19 (Hinxton)ENSG00000249297 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249297 [Gene_View]  ENSG00000249297 [Sequence]  chr4:171602683-171638763 [Contig_View]  LINC02174 [Vega]
ICGC DataPortalENSG00000249297
TCGA cBioPortalLINC02174
AceView (NCBI)LINC02174
Genatlas (Paris)LINC02174
WikiGenes105377536
SOURCE (Princeton)LINC02174
Genetics Home Reference (NIH)LINC02174
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02174  -     chr4:171602683-171638763 -  4q34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02174  -     4q34.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02174 - 4q34.1 [CytoView hg19]  LINC02174 - 4q34.1 [CytoView hg38]
Mapping of homologs : NCBILINC02174 [Mapview hg19]  LINC02174 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BE552051
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02174
Cluster EST : UnigeneHs.550719 [ NCBI ]
CGAP (NCI)Hs.550719
Alternative Splicing GalleryENSG00000249297
Gene ExpressionLINC02174 [ NCBI-GEO ]   LINC02174 [ EBI - ARRAY_EXPRESS ]   LINC02174 [ SEEK ]   LINC02174 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02174 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377536
GTEX Portal (Tissue expression)LINC02174
Human Protein AtlasENSG00000249297-LINC02174 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02174
DMDM Disease mutations105377536
Blocks (Seattle)LINC02174
Human Protein Atlas [tissue]ENSG00000249297-LINC02174 [tissue]
Protein Interaction databases
FunCoupENSG00000249297
BioGRIDLINC02174
STRING (EMBL)LINC02174
ZODIACLINC02174
Ontologies - Pathways
Huge Navigator LINC02174 [HugePedia]
snp3D : Map Gene to Disease105377536
BioCentury BCIQLINC02174
ClinGenLINC02174
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377536
Clinical trialLINC02174
Miscellaneous
canSAR (ICR)LINC02174 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02174
EVEXLINC02174
GoPubMedLINC02174
iHOPLINC02174
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:07 CEST 2018

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