Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02182 (long intergenic non-protein coding RNA 2182)

Identity

Other aliasLA16c-444G7.2
HGNC (Hugo) LINC02182
LocusID (NCBI) 101928880
Atlas_Id 79113
Location 16q24.2  [Link to chromosome band 16q24]
Location_base_pair Starts at 88194281 and ends at 88195217 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02182   53044
Cards
Entrez_Gene (NCBI)LINC02182  101928880  long intergenic non-protein coding RNA 2182
AliasesLA16c-444G7.2
GeneCards (Weizmann)LINC02182
Ensembl hg19 (Hinxton)ENSG00000260420 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260420 [Gene_View]  chr16:88194281-88195217 [Contig_View]  LINC02182 [Vega]
ICGC DataPortalENSG00000260420
TCGA cBioPortalLINC02182
AceView (NCBI)LINC02182
Genatlas (Paris)LINC02182
WikiGenes101928880
SOURCE (Princeton)LINC02182
Genetics Home Reference (NIH)LINC02182
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02182  -     chr16:88194281-88195217 +  16q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02182  -     16q24.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02182 - 16q24.2 [CytoView hg19]  LINC02182 - 16q24.2 [CytoView hg38]
Mapping of homologs : NCBILINC02182 [Mapview hg19]  LINC02182 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI741305 BX110403
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02182
Cluster EST : UnigeneHs.738259 [ NCBI ]
CGAP (NCI)Hs.738259
Alternative Splicing GalleryENSG00000260420
Gene ExpressionLINC02182 [ NCBI-GEO ]   LINC02182 [ EBI - ARRAY_EXPRESS ]   LINC02182 [ SEEK ]   LINC02182 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02182 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928880
GTEX Portal (Tissue expression)LINC02182
Human Protein AtlasENSG00000260420-LINC02182 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02182
DMDM Disease mutations101928880
Blocks (Seattle)LINC02182
Human Protein Atlas [tissue]ENSG00000260420-LINC02182 [tissue]
Protein Interaction databases
FunCoupENSG00000260420
BioGRIDLINC02182
STRING (EMBL)LINC02182
ZODIACLINC02182
Ontologies - Pathways
Huge Navigator LINC02182 [HugePedia]
snp3D : Map Gene to Disease101928880
BioCentury BCIQLINC02182
ClinGenLINC02182
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928880
Clinical trialLINC02182
Miscellaneous
canSAR (ICR)LINC02182 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02182
EVEXLINC02182
GoPubMedLINC02182
iHOPLINC02182
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:33:36 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.