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LINC02198 (long intergenic non-protein coding RNA 2198)

Identity

Other alias-
HGNC (Hugo) LINC02198
LocusID (NCBI) 101928885
Atlas_Id 79430
Location 5q13.1  [Link to chromosome band 5q13]
Location_base_pair Starts at 68967741 and ends at 69029927 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02198   53064
Cards
Entrez_Gene (NCBI)LINC02198  101928885  long intergenic non-protein coding RNA 2198
Aliases
GeneCards (Weizmann)LINC02198
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:68967741-69029927 [Contig_View]  LINC02198 [Vega]
TCGA cBioPortalLINC02198
AceView (NCBI)LINC02198
Genatlas (Paris)LINC02198
WikiGenes101928885
SOURCE (Princeton)LINC02198
Genetics Home Reference (NIH)LINC02198
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02198  -     chr5:68967741-69029927 -  5q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02198  -     5q13.1   [Description]    (hg19-Feb_2009)
LINC02198 - 5q13.1 [CytoView hg19]  LINC02198 - 5q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02198 [Mapview hg19]  LINC02198 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128486
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02198
Cluster EST : UnigeneHs.630474 [ NCBI ]
CGAP (NCI)Hs.630474
Gene ExpressionLINC02198 [ NCBI-GEO ]   LINC02198 [ EBI - ARRAY_EXPRESS ]   LINC02198 [ SEEK ]   LINC02198 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02198 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928885
GTEX Portal (Tissue expression)LINC02198
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02198
DMDM Disease mutations101928885
Blocks (Seattle)LINC02198
Protein Interaction databases
BioGRIDLINC02198
STRING (EMBL)LINC02198
ZODIACLINC02198
Ontologies - Pathways
Huge Navigator LINC02198 [HugePedia]
snp3D : Map Gene to Disease101928885
BioCentury BCIQLINC02198
ClinGenLINC02198
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928885
Clinical trialLINC02198
Miscellaneous
canSAR (ICR)LINC02198 (select the gene name)
DataMed IndexLINC02198
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02198
EVEXLINC02198
GoPubMedLINC02198
iHOPLINC02198
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:58 CEST 2019

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