Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02198 (long intergenic non-protein coding RNA 2198)


Alias (NCBI)-
HGNC (Hugo) LINC02198
LocusID (NCBI) 101928885
Atlas_Id 79430
Location 5q13.1  [Link to chromosome band 5q13]
Location_base_pair Starts at 68967741 and ends at 69029927 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC02198   53064
Entrez_Gene (NCBI)LINC02198    long intergenic non-protein coding RNA 2198
GeneCards (Weizmann)LINC02198
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:68967741-69029927 [Contig_View]  LINC02198 [Vega]
TCGA cBioPortalLINC02198
AceView (NCBI)LINC02198
Genatlas (Paris)LINC02198
SOURCE (Princeton)LINC02198
Genetics Home Reference (NIH)LINC02198
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02198  -     chr5:68967741-69029927 -  5q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02198  -     5q13.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02198 - 5q13.1 [CytoView hg19]  LINC02198 - 5q13.1 [CytoView hg38]
Genome Data Viewer NCBILINC02198 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK128486
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02198
Gene ExpressionLINC02198 [ NCBI-GEO ]   LINC02198 [ EBI - ARRAY_EXPRESS ]   LINC02198 [ SEEK ]   LINC02198 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02198 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02198 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928885
GTEX Portal (Tissue expression)LINC02198
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02198
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:02:49 CET 2022

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