Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02203 (long intergenic non-protein coding RNA 2203)

Identity

Other alias-
HGNC (Hugo) LINC02203
LocusID (NCBI) 727924
Atlas_Id 80055
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 21552795 and ends at 21640521 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02203   53069
Cards
Entrez_Gene (NCBI)LINC02203  727924  long intergenic non-protein coding RNA 2203
Aliases
GeneCards (Weizmann)LINC02203
Ensembl hg19 (Hinxton)ENSG00000280709 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280709 [Gene_View]  chr15:21552795-21640521 [Contig_View]  LINC02203 [Vega]
ICGC DataPortalENSG00000280709
TCGA cBioPortalLINC02203
AceView (NCBI)LINC02203
Genatlas (Paris)LINC02203
WikiGenes727924
SOURCE (Princeton)LINC02203
Genetics Home Reference (NIH)LINC02203
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02203  -     chr15:21552795-21640521 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02203  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02203 - 15q11.2 [CytoView hg19]  LINC02203 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC02203 [Mapview hg19]  LINC02203 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097598 BC048276 BC062994 BC107747 DQ786202
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187602
Consensus coding sequences : CCDS (NCBI)LINC02203
Cluster EST : UnigeneHs.721258 [ NCBI ]
CGAP (NCI)Hs.721258
Alternative Splicing GalleryENSG00000280709
Gene ExpressionLINC02203 [ NCBI-GEO ]   LINC02203 [ EBI - ARRAY_EXPRESS ]   LINC02203 [ SEEK ]   LINC02203 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02203 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)727924
GTEX Portal (Tissue expression)LINC02203
Human Protein AtlasENSG00000280709-LINC02203 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02203
DMDM Disease mutations727924
Blocks (Seattle)LINC02203
Human Protein Atlas [tissue]ENSG00000280709-LINC02203 [tissue]
Protein Interaction databases
FunCoupENSG00000280709
BioGRIDLINC02203
STRING (EMBL)LINC02203
ZODIACLINC02203
Ontologies - Pathways
Huge Navigator LINC02203 [HugePedia]
snp3D : Map Gene to Disease727924
BioCentury BCIQLINC02203
ClinGenLINC02203
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727924
Clinical trialLINC02203
Miscellaneous
canSAR (ICR)LINC02203 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02203
EVEXLINC02203
GoPubMedLINC02203
iHOPLINC02203
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:31:33 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.