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LINC02211 (long intergenic non-protein coding RNA 2211)

Identity

Other alias-
HGNC (Hugo) LINC02211
LocusID (NCBI) 105374693
Atlas_Id 80044
Location 5p14.1  [Link to chromosome band 5p14]
Location_base_pair Starts at 25190953 and ends at 25302280 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02211   53078
Cards
Entrez_Gene (NCBI)LINC02211  105374693  long intergenic non-protein coding RNA 2211
Aliases
GeneCards (Weizmann)LINC02211
Ensembl hg19 (Hinxton)ENSG00000245662 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245662 [Gene_View]  ENSG00000245662 [Sequence]  chr5:25190953-25302280 [Contig_View]  LINC02211 [Vega]
ICGC DataPortalENSG00000245662
TCGA cBioPortalLINC02211
AceView (NCBI)LINC02211
Genatlas (Paris)LINC02211
WikiGenes105374693
SOURCE (Princeton)LINC02211
Genetics Home Reference (NIH)LINC02211
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02211  -     chr5:25190953-25302280 +  5p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02211  -     5p14.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02211 - 5p14.1 [CytoView hg19]  LINC02211 - 5p14.1 [CytoView hg38]
Mapping of homologs : NCBILINC02211 [Mapview hg19]  LINC02211 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA860678
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02211
Cluster EST : UnigeneHs.628714 [ NCBI ]
CGAP (NCI)Hs.628714
Alternative Splicing GalleryENSG00000245662
Gene ExpressionLINC02211 [ NCBI-GEO ]   LINC02211 [ EBI - ARRAY_EXPRESS ]   LINC02211 [ SEEK ]   LINC02211 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02211 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374693
GTEX Portal (Tissue expression)LINC02211
Human Protein AtlasENSG00000245662-LINC02211 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02211
DMDM Disease mutations105374693
Blocks (Seattle)LINC02211
Human Protein Atlas [tissue]ENSG00000245662-LINC02211 [tissue]
Protein Interaction databases
FunCoupENSG00000245662
BioGRIDLINC02211
STRING (EMBL)LINC02211
ZODIACLINC02211
Ontologies - Pathways
Huge Navigator LINC02211 [HugePedia]
snp3D : Map Gene to Disease105374693
BioCentury BCIQLINC02211
ClinGenLINC02211
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374693
Clinical trialLINC02211
Miscellaneous
canSAR (ICR)LINC02211 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02211
EVEXLINC02211
GoPubMedLINC02211
iHOPLINC02211
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 13:57:13 CEST 2018

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